Claim Missing Document
Check
Articles

Found 2 Documents
Search

IDENTIFIKASI DAN KLASIFIKASI BAKTERI AMILOLITIK ISOLAT TG12, TG19, DAN TG31 PENYEBAB KEMASAMAN PADA TEPUNG SAGU BASAH BERDASARKAN ANALISIS GEN 16SrDNA Tri Gunaedi; Sebastian Margino; Langkah Sembiring; Rarastoeti Pratiwi
JURNAL PENELITIAN BIOLOGI BERKALA PENELITIAN HAYATI Vol 15 No 1 (2009): December 2009
Publisher : The East Java Biological Society

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (657.235 KB) | DOI: 10.23869/237

Abstract

16SrDNA gene were known essentialy for procaryotic life involved bacteria. The gene very concerved such as usefull for bacterial identification and classification in phylogeny tree constructed. The object of this research were identified and cllassified amylolitic bacteria TG12, TG19 and TG31 isolates, causers sourness on raw starch sago by 16SrDNA gene sequences analysis approach. The native isolates from raw starch sago under traditionality processing arround Jayapura and selected depend on activity amylolitic and organic acid productivity. Before DNA genom extraction, isolates were throught out generic assignment analysis. Futhermore DNA genom were amplified and purified by PCR with 27f and 1529r primers. The pure of DNA was sequenced by ABI PRISM 310 DNA sequencer with internal primers 27f, 357f, 790f and 1230f. The generic assignment resulted those isolates related with Bacillus. The 16S rDNA data were aligned with corresponding available Bacillus sequences retrieved from the NCBI database using the CLUSTAL X software. Phylogeny tree was constructed by PHYLIP programme and visualized by Treeview programme. Phylogenetic trees were and the extended the value of 16S rDNA sequencing in amylolitic bacteria causing sourness on raw starch sago. Completed 16S rDNA sequence data showed that two of the tested isolate TG12 formed a distinct center of diversity with Bacillus substilis DSM 10 AJ276351, isolate TG19 with Bacillus substilis strain 1778 EU982544 and TG31 similar genetic with Bacillus cereus strain WJL-063 FJ527559. Identification based on 16S rDNA gene sequences of amylolitic bacteria causing sourness on raw sago starch provided a powerful way of uncovering genetic of strain within the spesies Bacillus substilis and Bacillus cereus.
Sequence analysis of 18SrDNA gene from sagoplast degrading fungi Tri Gunaedi; Arsyam Mawardi
JURNAL PENELITIAN BIOLOGI BERKALA PENELITIAN HAYATI Vol 26 No 2 (2021): June 2021
Publisher : The East Java Biological Society

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.23869/bphjbr.26.2.20214

Abstract

The bioplastic can be made from sago flour and known as sagoplast. It was widely known that for making bioplastic, the addition of acetic acid and glycerol are needed. Products that are air-dried are easy to grow fungi within a few weeks. This makes the basis for researchers to undestand more about the character and identity of the sagoplast degrading fungi. Characterization and identification were carried out by observed morphology and analyzing the 18SrDNA gene sequence of fungal isolates that had grown on the sagoplast. Fungal isolates morphology showed yellowish-orange color with white thread-like mycelia and a blackish brown mace with white thread-shaped mycelia. These characters of fungal morphology that similar with Aspergillus. The gene sequences of the fungal isolates were aligned with reference gene sequences of the fungi obtained from the Gen Bank of the National Center for Biotechnology Information (NCBI). Sequence data analysis was performed by using the Clustal X program to determine the kinship and taxonomy of the fungal isolates that able to degrade sagoplast. The result showed that two fungal isolates, DFSP.J1 and DFSP.J4, were found and demonstrated their ability for degrading sagoplast. Isolate DFSP.J1 is related to Aspergillus flavus strain PSU2 LC127086.1, while isolate DFSP.J4 is related to Aspergillus niger IFO4033 D63697.1.