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All Journal ILMU KELAUTAN: Indonesian Journal of Marine Sciences Biosaintifika: Journal of Biology & Biology Education
Ocky Karna Radjasa
Faculty of Fisheries and Marine Science, Diponegoro University
Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences

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Analysis of Carotenoids and the Identification of Mangrove Sediment Bacteria of Segara Anakan, Cilacap Riyanti Riyanti; Meris Rahmawati; Nuning Vita Hidayati; Agung Dhamar Syakti; Ocky Karna Radjasa
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 23, No 4 (2018): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (429.884 KB) | DOI: 10.14710/ik.ijms.23.4.163-170

Abstract

The excessive consumption of artificial dyes can lead to negative effects on human body. Thus, the invention of natural dyes, such as carotenoids, is needed in order to reduce the negative impacts. Carotenoids are yellow, orange, and reddish yellow pigments produced by plants, animals, algae, and microorganisms. This study was aimed to analyze the carotenoid pigments of mangrove sediment bacteria in Segara Anakan, Cilacap, and to identify species of bacteria that can produce carotenoids. Carotenoids were analysed by using Thin Layer Chromatography (TLC) and UV-Vis spectrophotometer. Meanwhile molecular identification of bacteria was carried by 16S rDNA PCR and DNA sequence was analysed through a program called Basic Local Alignment Search Tool (BLAST). The kinship of bacteria was shown in Phylogenetic tree by using Bioedit and MEGA 5 software. Qualitative analysis by using TLC produced several pigments like: β-carotene, β-isorenieraten, lycopene, flavonoids, chlorophyll a, chlorophyll b and a feofitin with Rf value of 0.36-0.95. Quantitative analysis showed that bacteria KH (greenish yellow), KT (dark yellow) and KM (light yellow) produced carotenoids at 95.30 mg.g-1, 110.34 mg.g-1 and 25.349 mg.g-1. KH, KT and KM were suspected to be bacteria known as Streptomyces chartreusis, Bacillus megaterium and Streptomyces chromofuscus with similarity of 99%. Mangrove sediment bacteria had the potential of producing carotenoids as an alternative of eco-friendly natural dyes.
The Community Structure of Phytoplankton in Seagrass Ecosystem and its Relationship with Environmental Characterstics Gede Iwan Setiabudi; Dietriech G. Bengen; Hefni Effendi; Ocky Karna Radjasa
Biosaintifika: Journal of Biology & Biology Education Vol 8, No 3 (2016): December 2016
Publisher : Department of Biology, Faculty of Mathematics and Sciences, Semarang State University . Ro

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15294/biosaintifika.v8i3.6549

Abstract

The aimed of this study was to determine  the plankton communities and its relationship with the chemical and physical condition in seagrass ecosystem at Pegametan Bay. The composition and abundance of plankton were observed in the sea water underneath the surface and were identified based on the guideline of Illustration of the Marine Plankton of Japan. The water quality was measured in situ using WQC HI 9829. The water sample was measured using closed reflux spectrometry for COD, TOC analyzer for DOC and APHA 2102 (4500) method for Nt and Pt. There are 27 species of plankton identified, which can be classified into three groups. Diatom group consists of 18 species with a 74.56% abundance. The non-litoral group consists of 6 species with a 23.35% abundance. Moreover, dinoflagellate group consist of 3 species with a 2.09% abundance. An abundance of plankton greater than 104 cell.L-1 was found in diatome group (Nitzschia sp., Thalassiosira sp., Chaetoceros sp., Flagillaria sp., Thalassiothrix sp., and Melosira sp.) and non-litoral group (Oscillatoria sp. and Spirogyra sp.). The abundance of those species indicated the algae bloom phenomenon. Dinophysis sp. was also identified, which was harmful algal blooms.How to CiteSetiabudi, G. I., Bengen, D. G., Effendi, H., Radjasa, O. K. (2016). The Community Structure of Phytoplankton in Seagrass Ecosystem and its Relationship with Environmental Characterstics. Biosaintifika: Journal of Biology Biology Education, 8(3), 257-269.
Co-Authors Agung Dhamar Syakti Dietriech G. Bengen Gede Iwan Setiabudi Hefni Effendi Meris Rahmawati Nuning Vita Hidayati Riyanti Riyanti