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All Journal Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences The Journal of Experimental Life Sciences (JELS) Journal of Indonesian Tourism and Development Studies Biotropika Jurnal Pembangunan dan Alam Lestari AGRIVITA, Journal of Agricultural Science TREUBIA JSMARTech : Journal of Smart Bioprospecting and Technology Proceeding Biology Education Conference
Nia Kurniawan
Brawijaya University
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Chemistry Civil Engineering, Building, Construction & Architecture Control & Systems Engineering Decision Sciences, Operations Research & Management Education Environmental Science Immunology & microbiology Materials Science & Nanotechnology Medicine & Pharmacology Neuroscience Public Health Social Sciences

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Journal : TREUBIA

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GENETIC DIVERGENCE AND GEOGRAPHIC DISTRIBUTION OF FROGS IN GENUS FEJERVARYA FROM INDONESIA INFERRED FROM MITOCHONDRIAL 16S rRNA GENE ANALYSIS Igawa, Takeshi; Sumida, Masayuki; Kurniawan, Nia; Djong, Tjong Hon; Maideliza, Tesri; Hamidy, Amir; Hasan, Mahmudul
TREUBIA Vol 41 (2014): Vol. 41, December 2014
Publisher : Research Center for Biology

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14203/treubia.v41i0.361

Abstract

The Indonesian archipelago is an ideal setting for the study of speciation and biogeography. This archipelago is divided into three island groups based on zoogeography: Sundaland, Wallaceaand the Australian region. In this paper we used frogs in genus Fejervarya (Bolkay) to study biogeography and examine patterns of gene flow across proposed zoogeographic boundaries. Severalmolecular studies on Fejervarya species from Indonesia have been carried out, but comparative studies among members of the genus Fejervarya have yet to be performed. In order to elucidate genetic divergence and geographic distribution of these frogs, we conducted a molecular analysis of the mitochondrial 16S rRNA gene using 179 frogs from five Fejervarya species. In total we collected from 32 localities in Sumatra, Kalimantan (Indonesian part of Borneo), Java, Bali, Sulawesi and Lesser Sunda Islands in Indonesia. Molecular phylogenetic analysis recovered 35 haplotypes and showed that frogs in the genus Fejervarya were divided into two well-supported clades. The first group were of three species, F. limnocharis, F. iskandari and F. cf. verruculosa and the other group clade consisted of Fejervarya cancrivora and Fejervarya sp. (Sulawesi-type). The average sequence divergence among these four species ranged from 1.09 to 16.03% (mean = 11.29±2.83%). The present results clearly show that there are five Fejervarya species in the Indonesian archipelago. Fejervarya limnocharis and F. cancrivora are widely distributed and sympatric in Sumatra, Borneo and Java. Fejervarya iskandari is not endemic to Java and also occurs in the Lesser Sundas. Fejervarya cf. verruculosa and Fejervarya sp. (Sulawesi-type) are endemic to Lesser Sunda and Sulawesi Island, respectively. Key words: Fejervarya, genetic divergence, geographic distribution, 16S rRNA gene
Co-Authors Achmad Dadang Burhanuddin Adityas Arifianto Agung Nugroho Agung Pramana W.M Agung Pramana W.M Agung Pramana Warih Marhendra Agung Sih Kurnianto Agung Sih Kurnianto Agung Sih Kurnianto Agus Nurrofik Agus Suryanto Aguung Sih Kurnianto Ahmad Muammar Kadafi Amin Setyo Leksono AMIR HAMIDY Amir Hamidy Andri Maulidi Andri Maulidi Anggun Sausan Firdaus Ardiansyah, Franky Ardiantoro, Ari Ardyah Ramadhina Irsanti Putri Ardyah Ramadhina Irsanti Putri Arief Sugiharto Asmaul Khusnah Asmaul Khusnah Azrianingzih, Rodiyati Azrianingzih, Rodliyati Badiul Ulum Badiul Ulum Bagus Priambodo Bayu Hendra Prakosa Catur Retnaningdyah Djong Hon Tjong Dwi Anggorowati Rahayu Elsa Mufti Endik Deni Nugroho Estri Laras Arumingtyas Faldy Alifianto Fatchiyah Fatchiyah Fauzi, Muhammad Alif Firdaus, Anggun Sausan Fitra Arya Dwi Nugraha Fitra Arya Dwi Nugraha Franky Ardiansyah Haryono Haryono Herlin Aprilia Kartini Herlin Aprilia Kartini Imti Yazil Wafa Karina hanum wardany Karina hanum wardany Karuniawan Puji Wicaksono Kholilah, Tsaniyah Nur Kurnianto, Aguung Sih Lingga Nugraha Luchman Hakim Lutfita Fitriana Lutviyana Rahman Lutviyana Rahman Maharani, Tri Mahmudul Hasan, Mahmudul Maisuroh, Dalilatul Masayuki Sumida, Masayuki Mohamad Nasirudin Mumpuni Mumpuni Nashi Widodo Nobukazu Nakagoshi Pramudya, Muhammad Alif Imam Qothrun Izza Qothrun Izza Rijalullah, Muhammad Asyraf Rudi Candra Aditama Rudi Candra Aditama Shima Ramadani Sugiharto, Arief Takeshi Igawa, Takeshi Tesri Maideliza Tri Maharani Vendy Adrinanda Vendy Adrinanda Zain, Dhiyaa Syahlaa Bianca Febrinnisa