Indonesian Aquaculture Journal
Vol 17, No 2 (2022): (December, 2022)

ISOLATION AND IDENTIFICATION OF PARTIAL GROWTH HORMONE (GH) mRNA OF TIGER SHOVELNOSE CATFISH Pseudoplatystoma fasciatum (LINNAEUS, 1766)

Erma Primanita Hayuningtyas (Research Center for Fishery, National Research and Innovation Agency (BRIN), Jakarta, Indonesia and Research Institute for Ornamental Fish Culture, Ministry of Marine Affairs and Fisheries Jl. Perikanan No. 13, Pancoran Mas, Depok City, 16436, West J)
Eni Kusrini (Research Center for Fishery, National Research and Innovation Agency (BRIN), Jakarta, Indonesia and Research Institute for Ornamental Fish Culture, Ministry of Marine Affairs and Fisheries Jl. Perikanan No. 13, Pancoran Mas, Depok City, 16436, West J)
Abinawanto Abinawanto (Department of Biology, Faculty of Mathematics and Natural Sciences, University of Indonesia, Jl. Kampus UI, Depok City,16424, West Java, Indonesian)



Article Info

Publish Date
30 Dec 2022

Abstract

The growth of fish is regulated by growth hormones secreted in a limited amount by its pituitary glands. Tiger shovelnose catfish has a relatively faster growth indicating that some growth hormones suspectedly play roles in the process and could be used in improving other farmed fish species. This study aimed to isolate and identify the growth hormone (GH) mRNA gene in Tiger shovelnose catfish (Pseudoplatystoma fasciatum Linnaeus, 1766). The sample was isolated from the pituitary, the fish measuring 602 g and 43 cm body length; Total RNA was extracted using the Tri Reagent Kit, followed with cDNA synthesis. The success of the extraction was confirmed by quantification and PCR using the β-actin gene as an internal control. GH mRNA gene was isolated by RT-PCR method, with degenerated primers from seven catfish species sequence data in the NCBI gene bank. The single band from GH gene was cloned and sequenced. Total RNA quantification with a concentration of 227 ng/µL and purity of 1.821. The successful isolation of mRNA from the pituitary gland was confirmed by amplifying the β-actin gene generated at 300 bp. This isolation of the GH mRNA gene had a sequence length of 234 bp. Tiger shovelnose catfish GH gene consists of 17 amino acid residues. The GH gene of Tiger shovelnose catfish was close to that of striped catfish (P. hypophthalmus) and Indian catfish (Clarias batrachus) with almost similar homology value of 90.6 %. Partial GH gene from tiger shovelnose catfish can be used a molecular marker in revealing the role of growth hormone on fish development, fish biology, growth gene expression, selective breeding and other mechanisms related to the aquaculture.

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Journal Info

Abbrev

iaj

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

Indonesian Aquaculture Journal is a peer-reviewed and open access journal based in Indonesia that globally/internationally accepts and publishes scientific articles in the field of aquaculture. The journal is hosted and managed by the Center for Fisheries Research, Indonesian Ministry of Marine ...