Jurnal Bioteknologi & Biosains Indonesia (JBBI)
Vol. 10 No. 1 (2023): Juni 2023

MUTATION DETECTION OF MULTIDRUG-RESISTANT TUBERCULOSIS BY RT-PCR METHOD AS THE DIAGNOSTIC TOOL OF MDR-TB

Titta Novianti (a:1:{s:5:"en_US"
s:22:"Universitas Esa Unggul"
})

alfero Putra Iryanto (Universitas Esa Unggul)
feby feby (Universitas Esa Unggul)
callista marsya (Universitas Esa Unggul)
putri mega utami (Universitas Esa Unggul)
febriana dwi wahyuni (Universitas Esa Unggul)
henny saraswati (Universitas Esa Unggul)
seprianto (uni)
adri nora (Universitas Esa Unggul)
roaslein putri (Universitas Esa Unggul)
nie nie (Sitanala hospital)
sabar pambudi (BRIN pusat vaksimn dan obat)



Article Info

Publish Date
04 Jul 2023

Abstract

Eight percent of tuberculosis (TB) cases worldwide are resistant to rifampicin, with mutations occurring in the rpoB and katG genes. It is necessary to develop a specific multidrug-resistant (MDR) diagnostic technique using the RT-PCR method in Indonesia to aid in rapid and accurate diagnosis. In-silico testing using SnapGene software resulted in the design of DNA primers for the katG and rpoB genes, plasmids, and specific probes. This study employed a cross-sectional design using 30 non-MDR-TB and MDR-TB samples from RSUD Sitanala, Tangerang Banten, which were tested for amplification of the katG and rpoB genes using Sybr green RT-PCR. Validity testing was conducted using specific probes for the katG and rpoB genes. The amplification results showed that MDR-TB samples and MDR-TB plasmids required a longer time compared to non-MDR-TB samples and non-MDR-TB plasmids. The Quantification Cycle (Cq) value in non-MDR-TB samples was lower than the Cq value in MDR-TB samples. A t-test revealed a significant difference in Cq values of the rpoB and katG genes between MDR-TB and non-MDR-TB patients (p-value < 0.005). These differences in Cq values indicate that the findings of this study can serve as an initial reference for the development of an RT-PCR-based diagnostic kit for MDR-TB.

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Journal Info

Abbrev

JBBI

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Immunology & microbiology

Description

JBBI, Indonesian Journal of Biotechnology & Bioscience, is published twice annually and provide scientific publication medium for researchers, engineers, practitioners, academicians, and observers in the field related to biotechnology and bioscience. This journal accepts original papers, review ...