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Ratih Permatasari
Universitas Diponegoro
Engineering

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Implementation of Support Vector Machine - Recursive Feature Elimination for MicroRNA Selection in Breast Cancer Classification Ratih Permatasari; Adi Wibowo
Jurnal EECCIS (Electrics, Electronics, Communications, Controls, Informatics, Systems) Vol. 14 No. 1 (2020)
Publisher : Fakultas Teknik, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21776/jeeccis.v14i1.602

Abstract

Breast cancer is the most frequent cancer caused death among women. An attempt to reduce death cases caused by breast cancer, was to detect cancer cells when it still in early stage. MicroRNA is one of the biomarker for cancer that can be used to detect cancer cell even in its early stage. However, MicroRNA data tends to have thousand types of expression which required a lot of costs if it examined one by one thoroughly. Feature selection method can be used to extract important MicroRNAs that support clasification process between normal people and people with breast cancer. Support Vector Recursive Feature Elimination (SVM-RFE) is one of the feature selection method that can be used to select MicroRNA data. This research aims to produce the best smallest subset that contains selected MicroRNA expressions using the SVM-RFE as feature selection method. This experiment result showed that the best selected subset was able to provide 99% classification accuracy with only 3 MicroRNA expressions, where 2 from 3 selected MicroRNA hold potential as a biomarker of breast cancer.
Co-Authors Adi Wibowo