Jurnal Biosense
Vol 5 No 01 (2022): Edisi Juni 2022

KAJIAN SENYAWA HEXOSE DAN MALIC ACID SEBAGAI INHIBITOR PAPAIN LIKE PROTEASE (PLPro) CORONA VIRUS

Yohanes Bare (Universitas Nusa Nipa)
Frederiksen Novenrius Sini Timba (Universitas Nusa Nipa)
Sukarman Hadi Jaya Putra (Universitas Nusa Nipa)
M A Yohanita Nirmalasari (Universitas Nusa Nipa)
Dewi Ratih Tirto Sari (Universitas Ibrahimy)
Maximus M Taek (Fakultas Matematika dan Ilmu Pengetahuan Alam, Universitas Katolik Widya)



Article Info

Publish Date
20 Jun 2022

Abstract

Papain-like protease is a SARSCOV-2 protease that functions for ubiquitination in host cells. Caffeine compounds have been widely reported to have antioxidant, anti-inflammatory, antidiabetic, and antiobesity activities. However, hexose and malic acid compounds in coffee rind as potential inhibitors of the papain-like protease SARSCOV2 have not been reported. This study investigated the potential of malic acid and hexose compounds as PLPro inhibitor agents in inhibiting SARSCOV2 ubiquitination. In silico studies were used to identify the potential of the two compounds by interacting hexose and malic acid compounds with papain-like protease (PLPro) proteins with the Molegro virtual Docker 5 program. Next, the ligand-protein complex visualization was done with discovery studio version 5.0. hexose and malic acid compounds showed interactions with papain-like protease proteins on several active site residues. The interactions showed inhibition of ubiquitination and stimulation of interferon in host cells. The two compound complexes – PLPro protein showed hydrophobic interactions, hydrogen bonds, and van der Waals forces, which contributed to the formation of bond energy and strong bonds between compounds and proteins. In this study, it was concluded that hexose and malic acid compounds have the potential to act as inhibitors of papain-like protease (PLPro) protein.

Copyrights © 2022






Journal Info

Abbrev

BIOSENSE

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Immunology & microbiology Medicine & Pharmacology Public Health

Description

Jurnal Biosense menitikberatkan pada publikasi hasil penelitian biologi dan ilmu terapan bidang biologi. Artikel ilmiah dalam lingkup biologi yang meliputi: botani, zoologi, mikrobiologi, genetika, fisiologi, dan konservasi, sedangkan lingkup ilmu terapan biologi meliputi: Kesehatan/kedokteran, ...