Heca Journal of Applied Sciences
Vol. 1 No. 1 (2023): June 2023

QSAR Classification of Beta-Secretase 1 Inhibitor Activity in Alzheimer's Disease Using Ensemble Machine Learning Algorithms

Teuku Rizky Noviandy (Department of Informatics, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh 23111, Indonesia)
Aga Maulana (Department of Informatics, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh 23111, Indonesia)
Talha Bin Emran (Department of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, Bangladesh)
Ghazi Mauer Idroes (Department of Occupational Health and Safety, Faculty of Health Sciences, Universitas Abulyatama, Aceh Besar 23372, Indonesia)
Rinaldi Idroes (Department of Chemistry, Faculty of Mathematics and Natural Sciences Universitas Syiah Kuala, Banda Aceh 23111, Indonesia)



Article Info

Publish Date
30 May 2023

Abstract

This study focuses on the development of a machine learning ensemble approach for the classification of Beta-Secretase 1 (BACE1) inhibitors in Quantitative Structure-Activity Relationship (QSAR) analysis. BACE1 is an enzyme linked to the production of amyloid beta peptide, a significant component of Alzheimer's disease plaques. The discovery of effective BACE1 inhibitors is difficult, but QSAR modeling offers a cost-effective alternative by predicting the activity of compounds based on their chemical structures. This study evaluates the performance of four machine learning models (Random Forest, AdaBoost, Gradient Boosting, and Extra Trees) in predicting BACE1 inhibitor activity. Random Forest achieved the highest performance, with a training accuracy of 98.65% and a testing accuracy of 82.53%. In addition, it exhibited superior precision, recall, and F1-score. Random Forest's superior performance was a result of its ability to capture a wide variety of patterns and its randomized ensemble approach. Overall, this study demonstrates the efficacy of ensemble machine learning models, specifically Random Forest, in predicting the activity of BACE1 inhibitors. The findings contribute to ongoing efforts in Alzheimer's disease drug discovery research by providing a cost-effective and efficient strategy for screening and prioritizing potential BACE1 inhibitors.

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Journal Info

Abbrev

hjas

Publisher

Subject

Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences Engineering Health Professions Medicine & Pharmacology

Description

Heca Journal of Applied Sciences is a premier international scientific journal that publishes high quality original research articles, review articles, and case reports in the field of applied sciences. The journal mission is to encourage interdisciplinary research, promote knowledge sharing, and ...