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INDONESIA
HAYATI Journal of Biosciences
Published by Institut Pertanian Bogor
ISSN : 19783019     EISSN : 20864094     DOI : -
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences
HAYATI Journal of Biosciences (HAYATI J Biosci) publishes articles and short communication in tropical bioscience fields such as development, biotechnology, biodiversity and environmental issues. HAYATI J Biosci covers wide range of all life forms topics including virus, microbes, fungi, plants, animal and human. HAYATI J Biosci has been also indexed/registered in Crossref, DOAJ, CABI, EBSCO, Agricola and ProQuest.
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Articles 15 Documents
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Search results for , issue "Vol. 29 No. 2 (2022): March 2022" : 15 Documents clear
Antioxidant Activity of Endophytic Bacteria Derived from Hoya multiflora Blume Plant and Their Cellular Activities on Schizosaccharomyces pombe Nabila Tsoerayya Gustia Pudjas; Nisa Rachmania Mubarik; Rika Indri Astuti; Lisdar I Sudirman
HAYATI Journal of Biosciences Vol. 29 No. 2 (2022): March 2022
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.29.2.214-221

Abstract

Endophytic bacteria isolated from plant tissues can produce the same secondary metabolites as their host plants. One of the metabolites that the bacteria can produce is antioxidants. This research aimed to analyze and measure the antioxidant activities of two endophytic bacteria, i.e. Bacillus siamensis HMB1 and Bacillus aryabhattai HMD4 cultures, derived from Hoya multiflora Blume plant, a tropical epiphytic plant species that grows in Indonesia, and to identify their cellular effects on Schizosaccharomyces pombe. The active compounds went through extraction process, and the antioxidant activities were measured, the extracts went under phytochemical analysis, and their phenol and flavonoid contents were measured. In vitro analysis was carried out using S. pombe. The results of this research indicated that both cultures had antioxidant activities, where HMB1 showed the highest IC50 value (51.18 mg/ml) among all. In vitro analysis indicated that HMD4 bacterial crude extract in 250 ppm concentration showed the highest resistance effect and significantly enhanced S. pombe growth. In addition, the results of the LC-MS analysis suggested that a total of 14 compounds potentially had antioxidant activity.
Leaf Litter Decomposition and Nutrient Release of Three Native Tree Species in a Drained Tropical Peatland in Riau, Indonesia Ahmad Junaedi; Nina Mindawati; Avry Pribadi; Suryo Hardiwinoto
HAYATI Journal of Biosciences Vol. 29 No. 2 (2022): March 2022
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.29.2.182-191

Abstract

The decomposition and its nutrient release were the key ecological process that had a broad role in the forest ecosystem. This study aimed to investigate the leaf litter decomposition rate and its nutrient release of three native tree species of tropical peat swamp forest, namely Macaranga pruinosa, Macaranga gigantea, and Cratoxylum arborescens and one exotic species i.e Acacia crassicarpa. The decomposition and nutrient release were monitored in an experimental plot using litter bag technique. The initial litter quality of each litter and micro-environment properties were also observed. The result showed that the decomposition and its nutrient release were insignificantly different among native tree species and also between native species and Acacia crasssicarpa. The litter decomposition of all tree species was slow; with the range of k was 0.98-1.19 year-1. However, the P and K release from the decomposition of native species litter after four months of incubation were quickly, ranging 70-74% and 88-93%. We were suggested that the high of lignin content in the leaf litter (36-39%) was the main factor that made slow decomposition. These findings could be used as one of the tools in tree species selection for peat swamp forest rehabilitation.
Glycoengineering of Darbepoetin-α in CHO-DG44 Cells through Overexpression of α-2,3-sialyl-transferase and CMP-sialic Acid Transporter Adi Santoso; Endah Puji Septisetyani; Ratna Dwi Ramadani; Yana Rubiyana; Pekik Wiji Prasetyaningrum; Popi Hadi Wisnuwardhani; Arizah Kusumawati; Neny Nuraini
HAYATI Journal of Biosciences Vol. 29 No. 2 (2022): March 2022
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.29.2.204-213

Abstract

Sialic acid plays a very important role in determining the circulation life span of glycoprotein in various organisms. Therefore, having a high content of sialic acid is needed by glycoprotein therapeutic agents to be able to function as desired. For example, Darbepoetin (DPO), the 5 N-linked erythropoietin showed higher bioavailability and efficacy compared to 3 N-linked erythropoietin. However, in the DPO production process, the molecular weight can vary and is highly dependent on the content of sialic acid and its production host. To improve the DPO sialic acid contents in our CHO-DG44 expressing DPO, we have engineered the cells through overexpression of α-2,3-sialyl-transferase (ST) and CMP-sialic acid transporter (CST). The DPO contained in the supernatant of the engineered cells was analyzed by Western blot and characterized by using PNGase-F or neuraminidase enzyme digestions. The results showed that, two clones, overexpressing ST or CST, were obtained. The clones showed higher molecular weight of DPO as compared to DPO expressed by the parental cells, yet retained the same protein backbone. The overexpression of these two genes does not affect cell growth. This suggests that may be these cells beneficial for therapeutic glycoproteins.
The Structural Annotations of The Mir-122 Non-Coding RNA from The Tilapia Fish (Oreochromis niloticus) Arli Aditya Parikesit; Imron Imron; Rizky Nurdiansyah; David Agustriawan
HAYATI Journal of Biosciences Vol. 29 No. 2 (2022): March 2022
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.29.2.171-181

Abstract

Tilapia (Oreochromis niloticus) is an important fisheries commodity. Scientific efforts have been done to increase its quality. One of them is staging a premium diet such as a fat-enriched diet. The transcriptomics approach is able to provide the signatures of the diet outcomes by observing the micro(mi)RNA signature in transcriptional regulation. Hence, it was found that the availability of mir-122 is essential in the regulation of a high-fat diet in tilapia. However, this transcriptomics signature is lacking structural annotations and the complete interaction annotations with its silencing(si)RNA. RNAcentral website was navigated for the latest annotation of mir-122 from tilapia and other species as a comparison. MEGA X was employed to comprehend the miRNA evolutionary repertoire. The RNA secondary structure prediction tools from the Vienna RNA package and the RNA tertiary structure prediction tools from simRNA and modeRNA are secured with default parameters. The HNADOCK tools were leveraged to observe the interaction between mir-122 and its siRNA. The post-processing was conducted with the Chimera visualization tool. The secondary and tertiary structure of the mir-122 and its siRNA could be elucidated, docked, and visualized. In this end, further effort to develop a comprehensive molecular breeding tool could be secured with the structural annotation information.
Reef Fish in the Mudflats of Kaledupa Island in Wakatobi National Park, Indonesia Ernik Yuliana; Adi Winata; Hasan Eldin Adimu; Yuni Tri Hewindati; Wibowo A. Djatmiko
HAYATI Journal of Biosciences Vol. 29 No. 2 (2022): March 2022
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.29.2.245-254

Abstract

Although frequently described as low-fertility or low-productivity habitat, coastal mudflats serve as important feeding grounds for fish. Many fish species from adjacent coral reefs, seagrass beds, or mangroves foraging periodically in mudflats. Because of this foraging behaviour, some local fishermen are known to utilize the mudflats to catch fish. However, the impact of this catching activities to the ecosystem has not been fully discovered. An examination of the fish community structure and levels of environmental stress had carried out in the mudflat ecosystem of the coast of Kaledupa Island in Wakatobi National Park (WNP), Indonesia. Two mudflat study sites were selected from the shore of Balasuna and Tampara villages located between mangroves and coral reefs. Data were sampled from the fish catch of local fishermen using fish fences (sero) installed in each mudflat area. Fish community structure was analyzed using diversity index and index of relative importance (IRI). ABC curves and species exploitation rate were used to assess the local environmental pressure. A total of 74 fish species were recorded from the mudflats of Kaledupa, which was found to be dominated by reef-associated fish species, comprising 63 species and accounting for 85% of the total catch. Additionally, although both sites had relatively high reef fish diversity, the obtained Clarke’s W-statistic values were approximately 0, indicating that the local fish communities presented moderate levels of disturbance. Three out of five fish species with the highest IRI values were found to be over-exploited, namely Siganus canaliculatus, Lethrinus ornatus, and Lethrinus variegatus.

Page 2 of 2 | Total Record : 15

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