Joko Prasetiyono
Balai Besar Penelitian dan Pengembangan Bioteknologi dan Sumberdaya Genetik Pertanian

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Evaluation of Several Pup1-Lines of Rice (Oryza sativa L.) on Nutrient Solution and at the Field Joko Prasetiyono; Tintin Suhartini; Ida Hanarida Soemantri; , Tasliah; Sugiono Moeljopawiro; Hajrial Aswidinnoor; Didy Sopandie; Masdiar Bustamam
Indonesian Journal of Agronomy Vol. 40 No. 2 (2012): Jurnal Agronomi Indonesia
Publisher : Indonesia Society of Agronomy (PERAGI) and Department of Agronomy and Horticulture, Faculty of Agriculture, IPB University, Bogor, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (385.883 KB) | DOI: 10.24831/jai.v40i2.13200

Abstract

Phosphorus (P) deficiency is one of major problems in rice cultivation. Development of a tolerant variety to P deficient soil is expected to reduce the needs of P fertilizer. The aim of this research was to evaluate the agronomic performance of Pup1-introgression rice lines. This research consisted of two separate experiments, an evaluation on rice grown in nutrient solution in the greenhouse of ICABIOGRAD, Bogor; and field evaluation at upland rice screening site Taman Bogo, Lampung. The rice lines used were BC2 F3 derived from crossing of Situ Bagendit with Kasalath and NIL-C443, and from crossing of Batur with Kasalath and NIL-C443. Molecular analysis was conducted to verifiy the Pup1 introgression in the lines used and successfully confirmed the occurance of homozygote Pup1 segment in those lines. Evaluation of rice lines grown in nutrient solution was performed in a split plot factorial design, using the dose of Al (0 and 45 ppm Al3+) as main plots and dose of P (0.5 and 10 ppm P) as subplots. Field evaluation was performed in split plot design, with P fertilization (0 and 500 kg SP-18 ha-1) as main plots and BC2 F3 lines as the subplots. Evaluation using Yoshida nutrient solution showed that the BC2 F3 lines had greater total dry weight under low-P condition (37.5-112.5%), especially under Al-toxicity, compared to the respective parental varieties (Situ Bagendit and Batur). Field evaluation showed that the Pup1-introgression lines had greater shoot dry weight than the respective parental lines (10.5-74.82%). However there was no significnant effect of Pup1 introgression in terms of weight of filled grain.
PERBAIKAN PADI (Oryza sativa L.) VARIETAS CIHERANG UNTUK SIFAT UMUR GENJAH DAN PRODUKSI TINGGI MENGGUNAKAN MARKA MOLEKULER Joko Prasetiyono; Tasliah Tasliah; Ahmad Dadang; Fatimah Fatimah
BERITA BIOLOGI Vol 12, No 1 (2013)
Publisher : Research Center for Biology-Indonesian Institute of Sciences

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14203/beritabiologi.v12i1.518

Abstract

The improvement of rice (Oryza sativa L.) Ciherang variety for early maturity and high production traits was carried out by Marker Assisted Backcrossing (MAB) method using Nipponbare as donor parent. The foreground selection of Hd2 gene was laid on flanking markers of RM1362 and RM7601 in QTL region. The selection process of F1 to BC2F2 plants were based on molecular markers and agronomic characters. The BC2F3 plants were challenged to bacterial leaf blight to know their resistance in this hybridization. The results indicated that the foreground and background selection were not sufficient as selection tools therefore they would be more accurate if assosiated with agronomic characters. Four selected lines derived from Ciherang x Nipponbare crossed (BC2F3 plant # 283, 307, 373, and 462) could be promising lines with early maturity and high productioncompared to Ciherang. Selected BC2F3 lines flowered earlier than original Ciherang up to 7-10 days, while the yield increasing was 3.55 to 9.2% higher based on weight of filled grains/plant, and from 3.58 to 19.39% higher based on the number of filled grain/plant. However, all of BC2F3 lines were not resistant to bacterial leaf blight attack.
Analisis Keragaman 35 Aksesi Kelapa Sawit (Elaeis guineensis Jacq.) Asal BUDI SANTOSA; JOKO PRASETIYONO; AHMAD DADANG; DONATA S. PANDIN; . SOBIR; MEDDY RACHMADI; ALFRED P. MANAMBANGTUA
Buletin Palma Vol 16, No 2 (2015): Desember, 2015
Publisher : Pusat Penelitian dan Pengembangan Perkebunan

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (822.006 KB) | DOI: 10.21082/bp.v16n2.2015.183-194

Abstract

ABSTRAK Program pemuliaan untuk peningkatan produksi minyak kelapa sawit dapat dilakukan dengan cara melakukan seleksi plasma nutfah, observasi/eksplorasi lapang, maupun introduksi aksesi baru dari luar negeri. Teknologi seleksi kelapa sawit dapat dilakukan secara konvensional dan non-konvensional. Penelitian ini bertujuan untuk memperoleh informasi keragaman genetik aksesi kelapa sawit asal Kamerun  berdasarkan keragaman karakter morfologi, produksi awal, dengan menggunakan marka molekuler  SSR. Penelitian dilakukan di KP Sitiung dan BB Biogen. Sampel yang dipilih adalah aksesi yang memiliki produksi awal tandan buah segar (TBS) minimal 4 kg.  Sebanyak 35 aksesi kelapa sawit asal Kamerun dan 20 primer SSR digunakan dalam penelitian ini. Hasil pengamatan karakter morfologi menunjukkan bahwa tidak terdapat perbedaan karakter morfologi diantara 35 tanaman kelapa sawit yang produksi awalnya ≥ 4 kg TBS. Produksi awal kelapa sawit berkisar antara 4 - 9,5 kg TBS per tandan dengan koefisien keragaman rendah, yaitu < 20%. Berdasarkan analisis 20 primer SSR dihasilkan   enam pita dengan kisaran 4−12 alel. Jumlah alel dominan sangat mendominasi dibanding dengan alel jarang maupun alel sedang.  Nilai Polymorphism Information Content (PIC) yang diperoleh sebagian bernilai negatif, 11 primer (55%) bernilai positif. Primer MEgcl3639 menghasilkan nilai PIC tertinggi (0,65), sedangkan nilai PIC terendah pada primer MEgcl0046 (-0,48). Berdasarkan analisis UPGMA aksesi 35 kelapa sawit terbagi  ke dalam dua kelompok, yaitu kelompok I terdiri dari 34 aksesi pada tingkat kesamaan genetik 42,5 - 67,5%, dan  kelompok II, yaitu satu aksesi (D91.4). Aksesi  D91.4 memiliki komposisi genetik yang sangat berbeda dengan kelompok I, dapat digunakan sebagai calon tetua persilangan. Perlu penelitian lebih detail pada aksesi D91.4 ini untuk pengamatan karakter kadar minyak, ketebalan cangkang, daging buah, dll.Kata kunci : Kelapa sawit, Kamerun, produksi awal, SSR. Diveristy Analysis of 35 Oil Palm Accessions (Elaeis guineensis Jacq.) Originated from Cameroon Based on Early Production Character by Using SSR Markers ABSTRACT Oil palm breeding programs to increase oil palm production can be done by under going selection in the germplasm collection, observation/exploration in the field and introduction from abroad. The technology can also be done by conventional or non-convention always. This study aimed to obtain information about genetic diversity of palm accessions originated from Cameroon based on the diversity of morphology and early production characters by using SSR molecular markers. Selected samples were those  that had early production of fresh fruit bunches (FFB) of at least 4 kg. The  research were held in Sitiung Field Station and ICABIOGRAD. Accessions used were oil palm accessions  originated from Cameroon as many as 35 accessions, where as microsatellite primers used were as many as 20 SSR  primers. The observation result of morphological characters showed that 35 oil palm accessions with production level of  ≥4,00 kg of FFB were not statically different. Initial production of oil palm accession were ranged from 4,00 to 9,50 kg  FFB per cluster with low diversity coefficient of <20%, which indicating high level of genetic uniformity. Molecular  analysis by using 20 SSR primers resulted  in number of bands up to six, with a range of 4-12 alleles. Dominant alleles  were more dominat as compared to rare or medium alleles. Some of Polymorphism Information Content (PIC) values were  obtained  negative, and only 11 primers (55%) showed positive PIC value. In this study, the primer Megcl3639 produced  the highest PIC value (0.65), while the lowest value was obtained on the primer MEgcl0046 (-0,48). Based on the UPGMA  analysis, 35 oil palm accessions were divided into two groups. The first group was comprised by 34 accessions with similarity of 42,5 - 67,5%, where as group II was comprised by one accession (D91.4). Accession D91.4 has a genetic composition that is very different the group I, can be used as a prospective parent for crosses. More detailed research is needed on this D91.4 accessions such as oil content, shell thickness, thickness of fruit, etc.Keywords: Oil palm, Cameroon, early production, SSR.