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HAYATI Journal of Biosciences

hayati
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Published by Institut Pertanian Bogor

ISSN : 19783019 EISSN : 20864094 DOI : -

Core Subject : Science, Agriculture,

Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences

HAYATI Journal of Biosciences (HAYATI J Biosci) publishes articles and short communication in tropical bioscience fields such as development, biotechnology, biodiversity and environmental issues. HAYATI J Biosci covers wide range of all life forms topics including virus, microbes, fungi, plants, animal and human. HAYATI J Biosci has been also indexed/registered in Crossref, DOAJ, CABI, EBSCO, Agricola and ProQuest.

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Articles 8 Documents

Search results for , issue "Vol. 24 No. 3 (2017): July 2017" : 8 Documents clear

Recent Studies Toward the Development of Practical Diets for Shrimp and Their Nutritional Requirements Christian Larbi Ayisi; Xueming Hua; Andrews Apraku; Gyamfua Afriyie; Beatrice Amankwah Kyei
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

Shrimp is a very important source of protein which is patronized by almost half of the world's population, and hence a very important specie in aquaculture. There is the need for increase in shrimp production worldwide to meet consumer demands. However, shrimp production is hampered by high cost of commercial feeds. Increase in prices of fish oil and fish meal has led to calls for their substitute. This calls for substitute has resulted in researchers studying the nutritional requirement of shrimp. The rationale for this article is to review the literature available on recent studies toward the development of practical diets for shrimps focusing on the nutrients required by different species qualitatively as well as quantitatively. This review highlights on nutrient requirements with respect to growth and feed utilization. Digestibility of nutrients used in shrimp diets is also accounted for in this article.

Generation of Oxygen Free Radicals by Proflavine: Implication in Protein Degradation Mansour K.M. Gatasheh; Kannan Subbaram; Hemalatha Kannan; Imrana Naseem
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

Proflavine, an acridine dye, is a known DNA intercalating agent. In the present study, we show that proflavine alone on photoillumination can generate reactive oxygen species (ROS). These proflavine-derived ROS cause damage to proteins, and this effect is enhanced when the divalent metal ion Cu (II) is included in the reaction. Bathocuproine, a specific Cu (I) sequestering agent, when present in the reaction mixture containing Cu (II), was found to inhibit the protein degradation, showing that Cu (I) is an essential intermediate in the reaction. The effect of several scavengers of ROS such as superoxide dismutase, sodium azide, potassium iodide, and thiourea were examined on the protein damaging reaction. Potassium iodide was found to be the most effective in inhibiting protein damage followed by sodium azide and thiourea. Our results indicate the involvement of superoxide, singlet oxygen, triplet oxygen, and hydroxyl radicals in proflavine-induced damage to proteins.

Food Origin Fibrinolytic Enzyme With Multiple Actions Laurentia Stephani; Raymond Rubianto Tjandrawinata; Diana Nur Afifah; Yanti Lim; Wangsa Tirta Ismaya; Maggy Thenawidjaja Suhartono
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

Many health related problems such as cardiovascular diseases are associated with the formation of excessive clot in the blood (thrombus). Approaches in cardiovascular disease treatment are preventing the formation or removing the thrombus. The present thrombolytic agents can be classified as plasminogen activators, fibrinolytic enzyme which directly degrades fibrinogen or fibrin and heparin type which act as thrombin inhibitor. Recently, microbial fibrinolytic enzymes of food origin receive more attention that leads to escalating efforts to explore traditional fermented foods as the natural sources. We have successfully isolated microorganism from Indonesian fermented soybean tofu dregs “Oncom” that secretes fibrinolytic enzyme. The microorganism identified as Stenotrophomonas sp. is unique because most of the reported fibrinolytic microorganism belongs to Bacillus sp. This isolate was found to produce extracellular fibrinolytic enzyme which could degrade fibrinogen and fibrin directly as determined by fibrinogen zymography and fibrin plate methods. More importantly, the 30-kD purified enzymes was found to demonstrate not only fibrin and fibrinogen degradation capabilities, but also acted as thrombin inhibitor as determined using specific substrates for thrombin. This is the first report of a fibrinolytic enzyme that demonstrates additional synergistic activities. This finding accentuates the importance of further development of the enzyme into a powerful agent to treat the thrombus-related disease effectively.

Expression of Hypoxia-Inducible Factor-1α and Myoglobin in Rat Heart as Adaptive Response to Intermittent Hypobaric Hypoxia Exposure Margaretha Herawati; . Wardaya; Wawan Mulyawan; Fanny Septiani Farhan; Frans Ferdinal; Sri Widia A. Jusman; Mohamad Sadikin
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

The aim of this study was to investigate the influence of intermittent hypobaric hypoxia on the expression hypoxia adaptation proteins, namely hypoxia inducibla factor-1a (HIF-1a) and myoglobin (Mb). Twenty five male Sprague-Dawley rats were exposed to intermittent hypobaric hypoxia in a hypobaric chamber in Indonesian Air Force Institute of Aviation Medicine, for 49.5 minutes at various low pressure, 1 week interval for 4 times (day 1, 8, 15 and 22). HIF-1α and Mb protein were measured with ELISA. mRNA expression of Mb was measured with one step real time RT-PCR. HIF-1α protein levels increased after induction of hypobaric hypoxia and continues to decrease after induction of intermittent hypobaric hypoxia 3 times (ANOVA, p = 0.0437). mRNA expression and protein of Mb increased after induction of hypobaric hypoxia and continues to decrease after induction of intermittent hypobaric hypoxia 3 times (ANOVA, p = 0.0283; 0.0170), and both are strongly correlated (Pearson, r = 0.6307). The heart of rats adapted to intermittent hypoxia conditions by upregulation the expression of HIF-1a and myoglobin and then both return to normal level.

Mammary Gland Cell Culture of Macaca fascicularis as a Reservoir for Stem Cells Silmi Mariya; Fitriya Nur Annisa Dewi; Irma Herawati Suparto; Gregory K. Wilkerson; J. Mark Cline; . Permanawati; Diah Iskandriati; I Nengah Budiarsa; Dondin Sajuthi
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

The mammary gland contains adult stem cells that are capable of self-renewal and are likely target for neoplastic transformation leading to breast cancer. In this study, we developed a cell culture derived from the mammary glands of cynomolgus monkeys (Macaca fascicularis)(MfMC) and furthermore identified the expression of markers for stemness and estrogenreceptor-associated activities. We found that the primary culture can be successfully subcultured to at least 3 passages, primarily epithelial-like in morphology, the cultured cells remained heterogenous in phenotype as they expressed epithelial cell markers CD24, CK18, and marker for fibroblast S1004A. Importantly, the cell population also consistently expressed the markers of mammary stem cells (ITGB1 or CD29 and ITGA6 or CD49f), mesenchymal stem cells (CD73 and CD105) and pluripotency (NANOG, OCT4, SOX2). In addition to this, the cells were also positive for Estrogen Receptor (ER), and ER-activated marker Trefoil Factor 1, suggesting an estrogen responsiveness of the culture model. These results indicate that our cell culture model is a reliable model for acquiring a population of cells with mammary stem cell properties and that these cultures may also serve as a reservoir from which more purified populations of stem cell populations can be isolated in the future.

Where did Venomous Snakes Strike? A Spatial Statistical Analysis of Snakebite Cases in Bondowoso Regency, Indonesia Farid Rifaie; Tri Maharani; Amir Hamidy
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

Snakebite envenomation in Indonesia is a health burden that receives no attention from stakeholders. The high mortality and morbidity rate caused by snakebite in Indonesia is estimated from regional reports. The true burden of this issue in Indonesia needs to be revealed even starting from a small part of the country. Medical records from a Hospital in Bondowoso Regency were the data source of the snakebite cases. Three spatial statistical summaries were applied to analyze the spatial pattern of snakebite incidents. The comparison between statistical functions and the theoretical model of random distributions shows a significant clustering pattern of the events. The pattern indicates that five subdistricts in Bondowoso have a substantial number of snakebite cases more than other regions. This finding shows the potential application of spatial statistics for the snakebite combating strategy in this area by identifying the priority locations of the snakebite cases.

The Effects of Audible Sound for Enhancing the Growth Rate of Microalgae Haematococcus pluvialis in Vegetative Stage Marcelinus Christwardana; H. Hadiyanto
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

Physico-stimulant like audible sound is one of the new promising methods for enhancing microalgae growth rate. Here, microalgae Haematococcus pluvialis was cultivated with the addition of audible sound with titles “Blues for Elle” and “Far and Wide.” The objective of this research was to evaluate the effect of audible sound to the growth and productivity of microalgae. The experiment has been conducted by exposing the audible sound for 8 h in 22 days to microalgae cultivation. The result showed that microalgae H. pluvialis treated by the music “Blues for Elle” shows the highest growth rate (0.03 per day), and 58% higher than the one without audible sound. The average number of cells in stationary phase is 0.76 × 104 cells/mL culture and the productivity is 3.467 × 102 cells/mL/day. The pH of microalgae medium slightly decreases because of proton production during photosynthesisprocess. The kinetic rate constant (kapp) is 0.078 per day, reaction half-life (t1/2) is 8.89 days, and catalytic surface (Ksurf) is 1.66 × 10−5/day/cm2. In conclusion, this audible sound is very useful to stimulate microalgae growth rate, especially H. pluvialis.

Changes of Thymoquinone, Thymol, and Malondialdehyde Content of Black Cumin (Nigella sativa L.) in Response to Indonesia Tropical Altitude Variation . Herlina; Sandra Arifin Aziz; Ani Kurniawati; Didah Nur Faridah
HAYATI Journal of Biosciences Vol. 24 No. 3 (2017): July 2017
Publisher : Bogor Agricultural University, Indonesia

Black cumin cultivated in many subtropical regions in the world, including Asia, Middle East, and North Africa. The most active constituent of black cumin is thymoquinone representing 18.4%–24% of the volatile oil and thymol. Data about thymoquinone and thymol came from the country of origin, but no data from tropical region. This study aimed to analyze the production of chlorophyll, thymoquinone, thymol, and malondialdehyde from black cumin cultivated at three altitudes of Indonesian tropical region. The result showed that Kuwait accession cultivated at middle altitude contains the highest levels of thymoquinone (2940.43 mg/kg), and the highest levels of thymol were found in India accession cultivated at high altitude (141.46 mg/kg). Data showed that the level of malondialdehyde at low (220 meter above sea level [masl]) and middle (560 masl) altitudes is higher than high (1.280 masl) altitude.

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