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Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences
Published by Universitas Brawijaya
ISSN : 20875517     EISSN : 25274376     DOI : -
Core Subject : Agriculture, Social,
Agriculture, Biological Sciences & Forestry Environmental Science
The Journal of Tropical Life Science (JTLS) provides publication of full-length papers, short communication and review articles describing of new finding or theory in living system, cells and molecular level in tropical life science and related areas. The journal publishes articles that report novel findings of wide Tropical Life system phenomenon in the areas of biodiversity, agriculture, fisheries, health, husbandry, forestry and environmental technology. JTLS has 1 volume with 3 issues per year.
Arjuna Subject : -
Articles 15 Documents
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Search results for , issue "Vol. 11 No. 3 (2021)" : 15 Documents clear
Secondary Metabolite Ceiba pentandra Gaertn. as Biological Control to Canker Disease on Dragon Fruit Rachmi Masnillah; Ival Oktavian Nurtian Budi; Ankardiansyah Pandu Pradana; Fariz Kustiawan Alfarisy
Journal of Tropical Life Science Vol. 11 No. 3 (2021)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.11.03.10

Abstract

Canker diseases caused by Neoscytalidium dimidiatum are a serious threat for dragon fruit production.  Comprehensive and environmentally friendly control efforts are needed to reduce yield losses due to this disease. Cottonwood (Ceiba pentandra) is one of the plants that contain complex phytochemicals that can control phyto-pathogens. This study aimed to examine the potential of secondary metabolites produced from the leaves and bark of the C. pentandara as botanical fungicides. Parts of dragon fruit that are attacked by canker are isolated on Potatoes Dextrose Agar media. Observation of conidia and fungal spores using a binocular microscope with a magnification of 100×. The hyphal form of the N. dimidiatum is rectangular and clear. As botanical fungicides, the leaves and the bark of the C. pentandara are dried for 14 days. The extract solution then analyzed for it’s secondary metabolites. The results of the qualitative analysis showed that each leaf extract and bark (+) compound of flavonoids, alkaloids, tannins, and saponins. The quantitative results of secondary metabolites detected 304.3 mg.kg-1, Flavonoids and Tannins of 1.6 mg.kg-1. Secondary metabolites obtained were tested on the fungus N. dimidiatum with inhibitory parameters in vitro and in vivo. This study followed a factorial completely randomized design consisting of concentration factors and types of extract parts. The data obtained were then analyzed by ANOVA and significant treatments were further tested by Duncan Multiple Range Test (DMRT) at α = 5%. The combination treatment with a concentration of 40 mg ml-1 is more effective in controlling canker in indicators of inhibitory, the extent of the attack, and intensity of disease severity.
In silico Characterization of UGT74G1 Protein in Stevia rebaudiana Bertoni Accession MS007 Afiqah Rahmatullah Khan; Nor Iwani Mokhtar; Zarina Zainuddin; Nurul Hidayah Samsulrizal
Journal of Tropical Life Science Vol. 11 No. 3 (2021)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.11.03.09

Abstract

Stevia rebaudiana is being promoted as an alternative sweetener in particular for diabetic and obese patients due to its low-calorie property. The steady demand in the market for high-quality stevia extracts presents a challenge for enhanced production of steviol glycosides that are safe for human consumption. This study characterized the structure and content of gene involved in the production of UGT74G1 protein for S. rebaudiana accession MS007 through in silico analysis using transcriptome dataset of stevia MS007.  Homologous search using BLASTp show high similarity to Q6VAA6 RecName: Full=UDP-glycosyltransferase 74G1 (S. rebaudiana) as the top hit sequences. InterPro family and domain protein motif search revealed the presence and entry of IPR002213 and IPR035595. The construction of the phylogenetic tree was done by selecting 19 out of 102 protein sequences from BLASTp. The phylogenetic analysis showed the same protein family which is Asteraceae. ProtParam Ex-Pasy, PSIPRED and Phyre2 computed the primary, secondary, and tertiary structures for UGT74G1 protein. The UGT74G1 predicted tertiary structure scored 100.0% confidence by the single highest scoring template and coverage of 96%. The model has dimensions (Å) of X: 57.609, Y: 70.386, and Z: 58.351. Outcomes of this research will help to enhance the understanding of UDP-glycosyltransferase 74G1 (S. rebaudiana MS007) characteristic and enhance target identification processes to improve understanding of protein-protein interaction in S. rebaudiana MS007.
A Review on Enzymatic Response to Salt Stress and Genomic/Metagenomic Analysis of Adaptation Protein in Hypersaline Environment Habeebat Adekilekun Oyewusi; Muhammad Muhammad; Roswanira Abdul Wahab; Fahrul Huyop
Journal of Tropical Life Science Vol. 11 No. 3 (2021)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.11.03.11

Abstract

Microorganisms adapted to conditions of high salinity (low water activity) provide an understanding on how the problem of maintaining an efficient cell integrity under high osmotic stress conditions that had been tackled naturally. Almost all microbes adapting to extreme situations either by intracellularly amass inorganic ions (K+) to counterbalance high salt concentration or by synthesizing and accumulating certain organic solutes called compatible solutes that confer protection without affecting cell functions and this process may be chloride ion dependent in some microorganisms. However, the use of culture-independent method like genomic or metagenomics shields more light on the microbial diversity, gene structure and regulation as well as discovery of novel genes that led to understanding of their adaptation mechanism and roles in extreme environments. Therefore, microbes that survive this natural attenuation aimed at acclimatizing with the extreme environments could serve as the sources of biotechnologically essential molecules with an extensive array of uses.
Clinical and Laboratory Features of COVID-19 in Ulin Referral Hospital of South Kalimantan: Predictors of Clinical Outcome Haryati Haryati; Mohamad Isa; Ali Assagaf; Ira Nurrasyidah; Erna Kusumawardhani; Eko Suhartono; Fidya Rahmadhany Arganita
Journal of Tropical Life Science Vol. 11 No. 3 (2021)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.11.03.06

Abstract

Corona Virus Disease (COVID-19) is becoming a global pandemic. Indonesia, especially South Kalimantan had recorded increasing cases with a high fatality rate of 3.7%. Information about factors related to outcomes based on clinical and laboratory features in Indonesia is still limited. Identification of the risk is crucial to determine optimal management and reducing mortality. This retrospective study enrolled 455 adults COVID-19 patients, and data were extracted from medical records of Ulin General Hospital Banjarmasin. The latter is COVID-19 referral hospital in South Kalimantan between March-November 2020. Demographic data, comorbidities, and laboratory were all collected. Data were compared between survivors and non-survivors. Fisher’s exact test and chi-square were used to compare categorical variables. The Mann_Whitney U test was used to compare continuous variables. Analysis was continued by multivariate logistic regression then receiver operating characteristic (ROC) curve to determine cut-off value. The multivariate analysis showed that number of comorbidities [odds ratio (OR) 1,339 (95% confidence interval (CI): 1,064-1,685, P = 0,013) was a significant risk factor to the outcome. In laboratory, lactate dehydrogenase (LDH) [OR: 1.001, 95% CI: 1,000-1.002, P = 0.001], Ferritin (OR 1.000, CI: 1,000-1.001, P = 0.013), APTT (OR: 1.045, CI: 1.010-1.082, P = 0.012), and D-dimer (OR: 1.188, CI: 1.064 - 1.327, P = 0.002) were significant predictor factors but only LDH, ferritin, and D- dimer were obtained good AUC 0.731, 0.715, and 0.705, respectively. The cut of the value of LDH was 656.5 U/L, ferritin was 672.18 ng/ml, and D-dimer was 2.28 mg/L. Sensitivity and specificity were 66.7% and 68,0% for LDH, 83,2% and 56,3% for ferritin, and 62,8 and 70,8% for D-dimer. From this research, we revealed that the number of comorbidities was a risk factor for death. Elevated LDH, ferritin, and D-dimer could be good predictive factors for poor outcomes, thereby considering the accelerating management of COVID-19 patients.
Immunomodulatory Activity of Methanol Leaf Extract of Neem (Azadirachta indica Juss) Against Suppressor and Proinflammatory Molecules Supriyanto Supriyanto; Simon Bambang Widjanarko; Muhaimin Rifa'i; Yunianta Yunianta
Journal of Tropical Life Science Vol. 11 No. 3 (2021)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.11.03.07

Abstract

Neem plant is rich in bioactive constituents, which make it massively discussed the treatment of various diseases. A study on the immunomodulatory activities of neem is given here. This current work aimed to investigate the effects of neem leaf extract on immunocompetent cells. In vivo experiment was carried out using mice (Mus musculus)  induced with DMBA, comprising positive control, negative control, and treatments of neem leaf extracts (250, 500, and 1000 ppm). Data obtained from flow cytometric analysis were evaluated using BD Cellquest ProTM software, then statistically analyzed in SPSS version 21. Parametric analysis in one-way ANOVA was performed at a significance level of 5%. The significant difference was compared in the Duncan test. The results showed that administration of neem leaf extracts significantly affected the expression of CD4+, CD8+, CD25+, CD62L, IL-10, and IL-17 cells .Neem leaf extract has immunomodulatory activities by increasing pressure molecules and decreasing pro-inflammatory molecules

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