The Indonesian Biomedical Journal
Vol 12, No 4 (2020)

Risk Assessment in Hereditary Colorectal Cancer Family by Using APC and MSH2 mRNA Gene Expression and Bayesian Analysis

Tjahjadi Robert Tedjasaputra (Department of Internal Medicine, Tarakan General Hospital Jakarta, Jl. Kyai Caringin No.7, Jakarta)
Mochammad Hatta (Biology Molecular and Immunology Laboratory, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Muhammad Nasrum Massi (Biology Molecular and Immunology Laboratory, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Rosdiana Natzir (Department of Biochemistry, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Ilhamjaya Patellongi (Department of Physiology, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Marcellus Simadibrata (Department of Internal Medicine, Faculty of Medicine, Universitas Indonesia, Jl. Salemba Raya No.6, Jakarta)
Ibrahim Labeda (Department of Gastroenterology Surgery, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Rina Masadah (Department of Pathology Anatomy, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Muhammad Luthfi Parewangi (Department of Internal Medicine, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Prihantono Prihantono (Department of Oncology Surgery, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Andi Asadul Islam (Department of Neurosurgery, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Agussalim Bukhari (Department of Nutrition, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Budu Budu (Department of Ophthalmology, Faculty of Medicine, Universitas Hasanuddin, Jl. Perintis Kemerdekaan KM.10, Makassar)
Rinda Nariswati (Department of Statistic, School of Computer Science, Bina Nusantara University, Jl. Mandala No.2, Jakarta)



Article Info

Publish Date
02 Dec 2020

Abstract

BACKGROUND: Some of colorectal cancers (CRCs) are familial, however, heterozygote relatives have approximately 80% lifetime risk of cancer. Risk assessment of CRC’s family could be calculated by direct measurement of mRNA gene expression and Bayesian theorem which is modifying initial background of pedigree risk with additional conditional information. This application has not been reported.METHODS: The cross-sectional translational sequential studies were performed: (1) adenomatous polyposis coli (APC) and MutS homolog (MSH)2 mRNA quantitative RT PCR gene expressions in tissue and whole blood CRC patients; (2) gene expression was determined in matched controls; and (3) pedigree and Bayesian analysis was calculated in the patient’s family of Proband.RESULTS: Fourty CRC and 31 control subjects were enrolled. The mean blood APC level control’s group was 13,261±670 fold-change (fc) and blood MSH2 level was 12,219±756 fc. The cut-off points for hereditary APC was 12,195 fc and MSH2 was 11,059 fc. The mean APC blood level in CRC subject was 11,578±2,638 fc and MSH2 blood level was 11,411±2,912 fc. There were significant differences APC and MSH level between tissue and blood level in CRC. Eight of 40 CRC subjects had a history of familial CRC. Four patients and 10 Probands were available for recurrence risk evaluation of pedigree analysis, RNA PCR quantitative and Bayesian calculation.CONCLUSION: There was determined a cut-off point of hereditary mRNA quantitative expression. The APC and MSH2 levels in CRC subjects were significantly lower than controls. Bayesian analysis allowed for the calculation of relative risk in CRC family members and considered in clinical practice.KEYWORDS: hereditary CRC, APC gene, MSH gene, Bayesian analysis

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