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Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences
Published by Universitas Brawijaya
ISSN : 20875517     EISSN : 25274376     DOI : -
Core Subject : Agriculture, Social,
Agriculture, Biological Sciences & Forestry Environmental Science
The Journal of Tropical Life Science (JTLS) provides publication of full-length papers, short communication and review articles describing of new finding or theory in living system, cells and molecular level in tropical life science and related areas. The journal publishes articles that report novel findings of wide Tropical Life system phenomenon in the areas of biodiversity, agriculture, fisheries, health, husbandry, forestry and environmental technology. JTLS has 1 volume with 3 issues per year.
Arjuna Subject : -
Articles 815 Documents
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Variation of Fruit Color in Cakra Hijau, G1/M8 and HV-149 Chilli Pepper Cultivar: Physiology and Molecular Approach: Variation of Fruit Color in Cakra Hijau, G1/M8 and HV-149 Cultivar Estri Laras Arumingtyas; 'Ainun Sayyidah Zakiyah; Rosina Monica; Dian Siswanto
Journal of Tropical Life Science Vol. 13 No. 3 (2023)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.13.03.13

Abstract

The fruit color of chili pepper is an important characteristic in identification and classification and is often used as the basis for determining consumer preferences. Information on the relationship between chili fruit color and its molecular profile is very important in supporting selection activities in plant breeding. This study aims to identify genetic diversity associated with the fruit color of three genotypes of chili (Capsicum frutescens L.): Cakra Hijau, HV-149 and G1/M8, using Random Amplified Polymorphic DNA (RAPD) and Simple Sequence Repeat (SSR). Morphological confirmation was carried out according to Capsicum descriptors. Nineteen RAPD markers and six SSR markers were used for genetic variability assessment. Genetic variation was analyzed using the unweighted pair group method with the arithmetic mean and the Jaccard similarity index. The three chili genotypes had different fruit colors at each maturation stage. The immature Cakra Hijau fruit is dark green and turns dark red as it ripens. The immature fruits of the G1/M8 line are light green and turn red when ripe. Finally, immature HV-149 fruits are dark green and yellow when ripe. The SSR markers used in this study were unable to show polymorphism. On the other hand, the RAPD marker successfully detected genetic variation in the three chili genotypes and resulted in a total of 49 alleles. The average value of polymorphic information content of the RAPD primers used ranged from 0 to 0.296, with the highest index indicated by OPA-1. The dendrogram shows the separation of the three genotypes into two main clusters, with the first cluster consisting of the HV-149 variety and the second cluster consisting of Cakra Hijau and G1/M8 lines. This study revealed that there are genetic variations based on the morphological characteristics of fruit color at each ripening stage and RAPD band profile. The RAPD marker was more effective than the SSR marker for identifying the genetic diversity of fruit color in the three chilies studied.
Assessment of Riparian Ecosystem Health in the Tamiang River, Aceh, Indonesia as Remains Habitat of Batagur borneoensis (Schlegel & Muller, 1844): Riparian Habitat Quality for Tuntong Laut (Batagur borneoensis) Syifa Saputra; Endang Arisoesilaningsih; Nia Kurniawan; Catur Retnaningdyah
Journal of Tropical Life Science Vol. 13 No. 3 (2023)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.13.03.10

Abstract

The riparian zone along the Tamiang River, Aceh Province, is an important habitat for the survival of the tuntong laut (Batagur borneoensis) which is already threatened with extinction. This study aims to evaluate the quality and role of the riparian zone as a habitat for B. borneoensis along the Tamiang River, which can then be used as a reference in conservation. Riparian habitat quality was assessed by calculating the Qualitat del Bosc de Ribera (QBR) index, which was determined based on the total riparian cover, cover structure, cover quality, and channel alteration. In addition, observations of water quality (salinity, turbidity, and dissolved oxygen (DO)) and the number of riparian vegetation species were also carried out. Monitoring was carried out at five stations: Iyu River, Kampung Baru, Batang Lawang, Pusong Kapal Dermaga, and Pusong Kapal. The results showed variations in water quality between locations with DO and turbidity levels exceeding the quality standards set by the government. The richness of the types of riparian vegetation found ranged from 0-8 species (seedlings), 2-7 species (saplings), and 1-4 species (poles). The quality of riparian habitats in all study locations experienced significant degradation, including the euhemerobic and polyhemerobic (Hemeroby) categories, Cultural assisted system and Semi-transformed system (Naturalness), and Extreme degradation to poor-fair quality (QBR). The presence of B. borneoensis in the research location can adapt to the poor quality of riparian habitat. However, the density decreases significantly at higher salinity.
Characterization of β-glucosidases from Meridianimaribacter sp. CL38: Characterization of β-glucosidases from Meridianimaribacter sp. CL38 Clarine Wan Ling Hong; Sye Jinn Chen; Kok Jun Liew; Muhammad Ramziuddin Zakaria; Ming Quan Lam; Kheng Loong Chong; Chun Shiong Chong
Journal of Tropical Life Science Vol. 13 No. 3 (2023)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.13.03.09

Abstract

The production of second-generation biofuel requires a huge amount of freshwater. It is estimated that at least three gal of freshwater is used to produce one gal of biofuel. The replacement of freshwater with seawater serves as a potential alternative in biofuel generation. Therefore, salt-tolerant enzymes play an important role in saccharification and fermentation process. Halophilic β-glucosidase is one of the key enzymes for the process. In this study, the β-glucosidase of halophile Meridianimaribacter sp. CL38 isolated from mangrove soil was characterized. Strain CL38 achieved maximum production of β-glucosidase at 12th hour of growth. The β-glucosidase showed highest activity at 2% (w/v) NaCl while highly stable at salt concentration ranging from 1-2% (w/v) (more than 96% of relative activity). Its β-glucosidase activity remained active in the presence of 5mM Mn2+, Mg2+, Ca2+ ions, and 1% (v/v) Tween-20 and Tween-80. The draft genome sequence of strain CL38 was retrieved from GenBank database and submitted to dbCAN meta server for CAZymes annotation. Strain CL38 harbors 44 GHs and GH3 are annotated as β-glucosidases. The β-glucosidases of Meridianimaribacter flavus (99.61%) and Mesoflavibacter sabulilitoris (97.44%) showed the closest identity with Bgl3a and Bgl3b protein sequences from strain CL38, respectively. Glycoside hydrolase family 3 domain was identified in both enzymes via InterPro scan server. The presence of signal peptides indicated that both enzymes were secreted extracellularly. Five motifs were identified in Bgl3a and Bgl3b, with the active site (nucleophile) found at Asp296 and Asp297, respectively. Collectively, these β-glucosidases could be potentially used in the biofuel production, in particular the lignocellulosic biomass pretreatment process. This is the first attempt to characterize the β-glucosidase in genus Meridianimaribacter as so far none of the lignocellulolytic enzymes from this genus were characterized.
Effects of Different Zinc and Copper Concentrations in Soil on Morphological and Biochemical Properties of Ipomea aquatica: Zinc and Copper Effects on Ipomoea aquatica Fazilah Abd Manan; Raihana Ridzuan; Jessica Henisi; Ashwini Nair Prabakaran
Journal of Tropical Life Science Vol. 13 No. 3 (2023)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.13.03.15

Abstract

Zinc and copper pollution in agricultural lands due to anthropogenic activities has become a major environmental problem. While these metals are essential for plant growth, their excessive presence can lead to plant toxicity. This experiment aimed to investigate the effects of different concentrations of zinc and copper (0, 100, 200, and 300 ppm) in soil on the morphological and biochemical properties of I. aquatica, commonly known as water spinach. The morphological properties, including plant height, number of leaves, and stem diameter, were assessed, along with soil pH and electrical conductivity (EC). Biochemical properties, specifically the Total Phenolic Content (TPC) and Total Flavonoid Content (TFC) in plant tissues, were measured using colorimetric assays. The results revealed significant morphological changes in plant height, stem diameter, and number of leaves at 200 ppm zinc treatment compared to the control. Additionally, the number of leaves significantly increased at the 100 ppm copper treatment, while the stem diameter decreased significantly at 300 ppm. Both zinc and copper treatments slightly reduced soil pH and increased soil EC. At the 300 ppm treatment, substantial changes in phenolic and flavonoid contents were observed in the stems and leaves of I. aquatica. Copper treatment at 200 ppm increased the TPC of leaves, while 100 ppm copper treatment increased the TFC of stems. Furthermore, the 300 ppm zinc treatment significantly increased the TPC and TFC in stems and leaves. These findings indicate that zinc and copper concentrations have notable effects on the morphological and biochemical properties of I. aquatica. Therefore, it is crucial to maintain an appropriate balance of these metal elements to cultivate plants that are morphologically and physiologically resilient.
Amylase activity in various digestive organs and blood urea levels of Osphronemus gouramy with Chlorella vulgaris feed supplementation and reared in different system : Amylase activities and blood urea levels of Osphronemus gouramy Sorta Basar Ida Simanjuntak; Gratiana Ekaningsih Wijayanti; Maditaningtyas Hawwa Zuwanda; Elly Tuti Winarni
Journal of Tropical Life Science Vol. 13 No. 3 (2023)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.13.03.12

Abstract

Osphronemus gouramy is a potential Indonesian fish that needs to be supported by good nutritional feed and water quality in a culture system. The research on the effect of combining Chlorella vulgaris (C. vulgaris) supplementation with culture systems of biofloc and non-biofloc in gourami fish on amylase activity and blood urea level has not been conducted. Therefore, this study aims to determine the effect of C. vulgaris supplementation with different culture systems on the amylase activity of various digestive organs and blood urea levels. It obtains the best C. vulgaris supplementation feed combination to increase the amylase activity of various digestive organs and reduce blood urea levels. This research was carried out experimentally with a Factorial Completely Randomized Design consisting of two factors. Furthermore, gourami was fed with C. vulgaris levels of 0, 2, 3, 4, and 5 g kg-1 for 28 days and divided into biofloc and non-biofloc groups of culture systems. The amylase activity was measured at three pH buffers, and blood urea levels were analyzed using a urea kit. The results showed that amylase activity increased when supplemented with C. vulgaris 5 g kg-1 feed using the biofloc system, while blood urea levels decreased. C. vulgaris supplementation and biofloc system are alternative solutions to improving nutrition and water quality.

Page 82 of 82 | Total Record : 815

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