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All Journal HAYATI Journal of Biosciences Marine Fisheries: Jurnal Teknologi dan Manajemen Perikanan Laut Jurnal Ilmu dan Teknologi Kelautan Tropis Jurnal Ilmu-Ilmu Perairan dan Perikanan Indonesia Maspari Journal ILMU KELAUTAN: Indonesian Journal of Marine Sciences BULETIN OSEANOGRAFI MARINA Jurnal Lahan Suboptimal Maspari Journal Jurnal Wasian IJFAC (Indonesian Journal of Fundamental and Applied Chemistry) Jurnal Penelitian Sains IJEMS (Indonesian Journal of Environmental Management and Sustainability) SIMBIOSA Open Access DRIVERset Jurnal Wasian Journal of Marine Research
Fauziyah
PS. Ilmu Kelautan FMIPA-Universitas Sriwijaya
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Chemistry Decision Sciences, Operations Research & Management Earth & Planetary Sciences Education Energy Environmental Science Immunology & microbiology Library & Information Science Mathematics Physics Public Health

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Journal : HAYATI Journal of Biosciences

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COI Gene Analysis of Asian Horseshoe Crab in Banyuasin Estuarine Waters, Sumatra, Indonesia Fatimah Fatimah; Apon Zaenal Mustopa; Fauziyah; Anna Ida Sunaryo Purwiyanto; Langgeng Priyanto; Nita Puspita Sari; Fitri Agustriani; Rozirwan Rozirwan
HAYATI Journal of Biosciences Vol. 30 No. 3 (2023): May 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.3.567-575

Abstract

There is limited study on DNA barcoding of horseshoe crabs in South Sumatra, Indonesia. The present study was the first to record horseshoe crabs' COI DNA barcoding in three localities of Banyasin estuarine waters. The nucleotide composition was in a strong adenine thymine bias (AT = 63.90%) with high haplotypic diversity (Hd = 0.858) relative to low nucleotide diversity (π = 0.0534). A total of 16 haplotypes were recorded, of which two were in Carat Cape, 4 in Makati Jaya, and 12 in the Banyuasin river estuary (BRE), and Hap 1 was a dominant type (62.5%). The population differentiation (FST) value was varied, and only in the comparison of BRE-Carat Cape was significant (FST = 0.637), while the gene flow (Nm) value in Makati Jaya-BRE was high (6.563). The neutrality test, Tajima's D (0.4142), and Fu's Fs values were negative (-0.492), suggesting these populations have experienced a current bottleneck or multiplication. Analysis of molecular variation (AMOVA) suggested that 68% was distributed within populations. The haplotype network, PCoA, and phylogenetic of COI DNA sequences clustered in three groups correspond to Carcinoscorpius rotundicauda, Tachypleus gigas, and Tachypleus tridentatus. This finding is a matter of concern for managing and conserving horseshoe crab species in Banyuasin estuarine waters.
Co-Authors . Hadi ., Hadi A Agussalim AGUNG SETIAWAN Andi Agussalim Anna Ida S Purwiyanto Anna Ida S Purwiyanto, Anna Ida S Anna Ida Sunaryo Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo, Anna Ida Apon Zaenal Mustopa Apriansyah Putra Aristiantin, Yeshi Asia Afriyani Bakti Satria Christie Indah Sari Christie Indah Sari, Christie Indah Delas Yuniardi Delas Yuniardi, Delas Desi Melda Situmorang Dian Rahmat Dian Rahmat, Dian Dika Ardila Dilah Zulhaniarta Dilah Zulhaniarta, Dilah Eddy Ibrahim Elfita . Eriyana Yulistia Fatimah Fatimah Fitri Agustriani Fitri Agustriani Freddy Supriyadi Freddy Supriyadi Freddy Supriyadi Gugik Gustaman Gustaman, Gugik Hadi Hadi hartoni . Hartoni ., Hartoni Hartoni Hartoni Hartoni Hartoni Hasan, Winanda Muhammad heriansyah hidayat Hermansyah Heron Surbakti hidayat, heriansyah Hidayattullah, Adietya Ramadhan Hidayatullah, Adietya Ramadhan Indra Jaya Isnaini ., Isnaini Jaya A Jaya A Khairul Saleh Khotimah, Ria Kusnul Komang Suryati Kurniawan . Kurniawan . Langgeng Priyanto Lilik Maslukah Mardasin, Wahyudi Mazidah Mazidah Muhammad Hendri Muharom Ikbal Nanda Nurisman Ngudiantoro . Ningsih, Ellis Nurjuliasti Nita Puspita Sari Novi Angraini Nurhayati . Nurisman, Nanda Onolawe Prima Sibagariang Putri, Ika Juniawati Ratih Wijayanti Redho Yoga Nugroho Ria Kusnul Khotimah Riana Pasaribu Riana Pasaribu Rika Dwi Susmiarni, Rika Dwi Rio Nopandri Rio Nopandri Riris Aryawati Riris Aryawaty Robiyanto H Soesanto Rozirwan . Rujito Agus Suwignyo Sarno . Sibagariang, Onolawe Prima Siti Masreah Bernas Situmorang, Desi Melda Sutan Barita S Tambunan Tengku Zia Ulqodry Tri Damayanti Tuti Afridanelly Tuti Afridanelly Tuti Afridanelly, Tuti Vina Fitriana Welly Nailis Wijopriono Wijopriono Wike Ayu Eka Putri Yeshi Aristiantin Yulianto Suteja Yulifa Handayani Yundari, Yundari