Claim Missing Document
Check
Articles

Found 2 Documents
Search
Journal : Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences

Bovine And Human Zona Pellucida 3 Gene Glycans Site Prediction Using In Silico Analysis Mubarakati, Nurul Jadid; Aulanni'am, Aulanni'am; Sumitro, Sutiman Bambang; Ciptadi, Gatot
Journal of Tropical Life Science Vol 4, No 3 (2014)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.04.03.08

Abstract

Zona pellucida is one of the protective layer of the egg cell and has a function as an intermediary species-specific fertilization. Glycoproteins of human and bovine zona pellucida is composed of three types, namely ZP1, ZP2 and ZP3. ZP3 gene has amino acid sequence homology with other mammals. Oligosaccharides components of the zona pellucida glycans are composed from units of asparagine residues (N -linked) and serine/threonine (O -linked). The aims of this study was to analyze the DNA sequences of human and bovine and further predicts glycans site on amino acid sequence of human and bovine ZP3. In this study, ZP3 gene fragments have been isolated from bovine and humans were analyzed in Silico. This work were conducted by comparing the data of DNA sequence from human and bovine PCR product using NCBI BLAST. The results showed that there were similarities at amino acid positions number 23-38. bZP3 sequence had three glycans site (Asn-X-Thr/Ser) and one site on hZP3 glycans. One of the sites was conserved between the two species.
Bovine And Human Zona Pellucida 3 Gene Glycans Site Prediction Using In Silico Analysis Nurul Jadid Mubarakati; Aulanni'am Aulanni'am; Sutiman Bambang Sumitro; Gatot Ciptadi
Journal of Tropical Life Science Vol. 4 No. 3 (2014)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.04.03.08

Abstract

Zona pellucida is one of the protective layer of the egg cell and has a function as an intermediary species-specific fertilization. Glycoproteins of human and bovine zona pellucida is composed of three types, namely ZP1, ZP2 and ZP3. ZP3 gene has amino acid sequence homology with other mammals. Oligosaccharides components of the zona pellucida glycans are composed from units of asparagine residues (N -linked) and serine/threonine (O -linked). The aims of this study was to analyze the DNA sequences of human and bovine and further predicts glycans site on amino acid sequence of human and bovine ZP3. In this study, ZP3 gene fragments have been isolated from bovine and humans were analyzed in Silico. This work were conducted by comparing the data of DNA sequence from human and bovine PCR product using NCBI BLAST. The results showed that there were similarities at amino acid positions number 23-38. bZP3 sequence had three glycans site (Asn-X-Thr/Ser) and one site on hZP3 glycans. One of the sites was conserved between the two species.
Co-Authors Agung Pramana W.M Agung Pramana W.M Agus Budiarto Agus Budiarto Agus Susanto Ali Harris Angelina N. Tethool Anis Mei Munazaroh Anis Mei Munazaroh Apriani Herni Rophi Ardyah Ramadhina Irsanti Putri Ardyah Ramadhina Irsanti Putri Ardyah Ramadhina Irsanti Putri Aris Subagyo Asma Naili Salsabila Aulanni'am Aulanni'am Aulanni'am, Aulanni'am Aulanni’am A Badriyah B Bambang Susilo Bilqis Bilqis Bima Prakasa Dermawan Sutopo Budi Siswanto Dian Ratnawati Doni Herviyanto Eko Wahyudi Enni Mutiati Eva Ari Wahyuni Fadillah Putra I., Sulistyoningtyas I.D. Retnaningtyas Insafitri, I Karim Khalifa Zamuna KIKI FIBRIANTO Kuswati Kuswati Laili Windah Fauziah Lilik Eka Radiati Liza Choirun Nisa M, Nur Ihsan M.F. Wadjdi Marjono, Marjono Marjuki Marjuki Mirsa Ita Dewi Moch. Nasich Mohammad Nur Ihsan Mudawamah Mudawamah Mudawamah Mudawamah Muhammad Arwani Muhammad Nur Ihsan Muhammad Nur Ihsan Muhammad Rizar Zakaria Nur Ihsan Nurgiartiningsih, V. M. A. Nurul Jadid Mubarokati Omar Sambou R. P. Putra Retnaningtyas, irawati Dinasari Rizka Gitta Almaida Rizki Putra Samudra Rizki Putra Samudra Rosidi Azis Rosidi Azis Roy Ardy Colas Napitupulu S. Chuzaemi S. Susilowati S. Suyadi Septiawan Putranto Septiawan Putranto Setyawan, Hendrix Yulis Siska Nanda Widhaningrum Siska Nanda Widhaningrum Sri Hindrawati Sri Rahayu sri rahayu Sri Rahayu Sri Rahayu Sri Rahayu Sri Rahayu Sri Rahayu Sri Rahayu Sri Wahjuningsih Sunaryo Sunaryo Sunaryo, Moch. Aris Sutiman B. Sumitro Sutiman Bambang Sumitro Suyadi Suyadi Suyadi Suyadi Syafrizal Muhammad Syahrul Kurniawan Teguh Wicaksono Tri Eko Susilorini Trinil Susilawati Trinil Susilawati Veronica Margareta Ani Nurgiartiningsih Woro Busono, Woro Wulandari, Eka Shinta Yudit Oktanella, Yudit Zulvado Satria Putra Yuwono