Article Per Year (5 Year)
p-Index From 2019 - 2024
3.077
P-Index
This Author published in this journals
All Journal BULETIN OSEANOGRAFI MARINA Bioma : Berkala Ilmiah Biologi Jurnal Ilmu Lingkungan Jurnal Natur Indonesia Jurnal Akademika Biologi Microbiology Indonesia Jurnal Bioteknologi & Biosains Indonesia (JBBI) Biosaintifika: Journal of Biology & Biology Education Berkala Bioteknologi Jurnal Biologi Tropika NICHE Journal of Tropical Biology Buletin Anatomi dan Fisiologi (Bulletin of Anatomy and Physiology) Penbios: Jurnal Pendidikan Biologi dan Sains International Journal of Research in Community Services Prosiding Konferensi Nasional PKM-CSR Makara Journal of Science AGRIC Open Access DRIVERset
Rejeki Siti Ferniah
Biotechnology Study Program , Biology Department, Faculty Of Sains And Natural Sciences, Diponegoro University
Agriculture, Biological Sciences & Forestry Humanities Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Chemistry Control & Systems Engineering Earth & Planetary Sciences Economics, Econometrics & Finance Education Energy Engineering Environmental Science Health Professions Immunology & microbiology Medicine & Pharmacology Nursing Public Health Social Sciences Other

Published : 36 Documents Claim Missing Document
Claim Missing Document
Check
Articles

Found 36 Documents
Search

 1   2   3   4 
Analysis of The Open Reading Frame (ORF) 29-TrnC (GCA) Sequence to Detect Indica and Japonica Sub Species on Upland Rice of Situ Bagendit and Inbred Rice of Ciherang Istiana, Rohma; Kusumaningrum, Hermin Pancasakti; Ferniah, Rejeki Siti
Biosaintifika: Journal of Biology & Biology Education Vol 10, No 1 (2018): April 2018
Publisher : Department of Biology, Faculty of Mathematics and Sciences, Semarang State University . Ro

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15294/biosaintifika.v10i1.12626

Abstract

The identification and the characterization of genetic diversity of rice was the first step in the rice plant breeding program. This study aimed to detect indica or japonica sub-species on upland rice Situ Bagendit and inbred rice Ciherang using molecular markers ORF 29-TrnC (GCA) on the chloroplast genome. Rice was included to the indica sub-species if the 32 bp insertion on ORF 29-TrnC (GCA) sequence was found, on the contrary, if the deletion 32 bp on ORF 29-TrnC (GCA) was found then it was included to the japonica sub-species. DNA isolation was examined from the leaves of the rice plants, and then it tested quantitatively to determine the transparency and DNA concentration from the isolation results. PCR amplification was performed using a pair of primers CP2 and it was followed by agarose gel electrophoresis. The visualization of the DNA bands used the gel documentation. Sequencing of PCR products produced a long base 390 bp in Situ Bagendit rice and 390 bp in Ciherang rice. Analysis of the sequences showed that the insertions occurred throughout the 32 bp in Situ Bagendit rice and the insertions occurred throughout the 32 bp in Ciherang rice. The results showed that upland rice Situ Bagendit and inbred rice Ciherang were included in the indica sub-species. The knowledge of variety of genetics of rice can be used as bio-information in the plant breeding program. Further, the knowledge can be used to protect in genetic power source, the selection and the composing of superior varieties of rice which is tolerant with kinds of biotic and abiotic factor.
Identification and Cluster Analysis of Pitcher Plant (Nepenthes spp.) from South Sumatera Indonesia Lestari, Weni; Jumari, Jumari; Ferniah, Rejeki Siti
Biosaintifika: Journal of Biology & Biology Education Vol 10, No 2 (2018): August 2018
Publisher : Department of Biology, Faculty of Mathematics and Sciences, Semarang State University . Ro

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15294/biosaintifika.v10i2.13968

Abstract

Nepenthes spp. is a typical plant of Southeast Asia especially Indonesia which has a special leaf modification called a pitcher. The largest number of Nepenthes spp. species in Indonesia is on the island of Sumatra. The purpose of this reseach was to identify and analyze cluster Nepenthes spp. from South Sumatra based on morphological characteristics. The specimens were collected from the forest of Tekorejo Village, Air Itam Village and cultivation location in Palembang city of South Sumatra. Identification of morphological characters performed on the characteristics of root, stem, leaves, and pitcher. The morphological data is used for cluster analysis using NTSYS software version 2.02. The identification results showed 9 variants of Nepenthes spp. which belong to the species N. mirabilis, N. gracilis, and N. sumatrana. Dendogram analysis results form two main clusters with a similarity value of 22%. The first cluster consists of N. mirabilis and N. sumatrana. The second cluster consists of N. gracilis. Based on the results of this study can be concluded that the species Nepenthes spp. South Sumatra is N. mirabilis, N. gracilis, and N. sumatrana. The results of this study will be dedicated to updating information about the existence of Nepenthes spp. from South Sumatra and his cluster.
ISOLASI KHAMIR DARI BATANG TANAMAN TEBU DAN IDENTIFIKASINYA BERDASARKAN SEKUENS INTERNAL TRANSCRIBED SPACER Anggraini, Ika; Ferniah, Rejeki Siti; Kusdiyantini, Endang
Jurnal Bioteknologi & Biosains Indonesia (JBBI) Vol 6, No 1 (2019): June 2019
Publisher : Badan Pengkajian dan Penerapan Teknologi (BPPT)

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1938.168 KB) | DOI: 10.29122/jbbi.v6i1.3276

Abstract

Isolation of Yeasts from Sugarcane Stems and Their Identification Based on Internal Transcribed Spacer Sequences ABSTRACTFermentative yeasts used in food, health, and energy industries need to be explored to discover their potential. The purpose of this study was to obtain fermentative yeast isolates from sugarcane stems and subsequently to undertake morphological, biochemical, and molecular identification. The isolation of epiphytic and endophytic yeasts was carried out by spread plate method using sugarcane soak water and sugarcane juice on potato dextrose agar (PDA) and yeast-glucose-peptone (YGP) agar media. Morphological identification was based on macroscopic and microscopic observations. Biochemical identification was performed using carbohydrate fermentation and 50%-glucose media tests. Selected isolates were identified molecularly using Internal Transcribed Spacer (ITS). Seven yeast isolates were obtained, of which isolate Ed 1B was selected. Isolate ED 1B was of round colonies, creamy white colour, shiny, embossed, and wavy appearance, ovoid cell shape with a cell diameter of 4.74 µm. It had budding cells, was able to ferment glucose and sucrose (but not lactose), and grew on 50 %-glucose media. Results of BLAST showed that isolates Ed 1B had 99% homology with Kodamaea ohmeri.Keywords: isolation, ITS, molecular identification, Saccharum officinarum L., yeast ABSTRAKKhamir fermentatif yang digunakan dalam industri pangan, kesehatan dan energi perlu dieksplorasi untuk mengetahui potensinya. Tujuan penelitian ini adalah untuk memperoleh isolat khamir fermentatif dari batang tebu dan untuk kemudian diidentifikasi secara morfologi, biokimia dan molekuler. Isolasi khamir epifit dan endofit dilakukan dengan metode cawan sebar dari air rendaman tebu dan jus tebu pada media potato dextrose agar (PDA) dan yeast-glucose-peptone (YGP). Identifikasi morfologi berdasarkan pengamatan makroskopis dan mikroskopis. Identifikasi biokimia menggunakan uji fermentasi karbohidrat dan uji media glukosa 50%. Isolat terpilih diidentifikasi molekuler menggunakan Internal Transcribed Spacer (ITS). Hasil isolasi memperoleh 7 isolat khamir. Satu isolat terpilih (Ed 1B) didapatkan dan memiliki ciri-ciri koloni bulat, putih krem, mengkilap, timbul, bergelombang, bentuk sel ovoid dengan diameter sel 4,74 µm, memiliki budding cell, mampu memfermentasi glukosa dan sukrosa, tidak memfermentasi laktosa, serta tumbuh pada media glukosa 50%. Hasil BLAST menunjukkan bahwa isolat Ed 1B memiliki homologi 99% dengan Kodamaea ohmeri.Kata Kunci: identifikasi molekuler, isolasi, ITS, khamir, Saccharum officinarum L.
Interaksi Kapang Patogen Fusarium oxysporum dengan Bakteri Kitinolitik Rizosfer Tanaman Jahe dan Pisang Ferniah, Rejeki Siti; Pujiyanto, Sri; Purwantisari, Susiana; Supriyadi, Supriyadi
Jurnal Natur Indonesia Vol 14, No 1 (2011)
Publisher : Lembaga Penelitian dan Pengabdian kepada Masyarakat Universitas Riau

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (51.542 KB) | DOI: 10.31258/jnat.14.1.56-60

Abstract

Fusarium oxysporum is a pathogenic fungi for many plants. The fungi have chitin cell wall that can be degraded by chitinase fromchitinolytic bacteria. Aim of this research is determine how the interaction between the bacteria and F.oxysporum. Bacteria were isolatedfrom plant rizosfere. Chitinolytic activity were measured based on the clear zone around the colony in chitin medium. Bacteria and fungiinteraction were determined by an antagonistic test. This research showed that there were 9 chitinolytic bacteria. J4 and P3 had highchitinolytic index, that are 3 and 3.33, respectively. The two isolates antagonist to F.oxysporum, which the bacteria prevent growth of thefungi. The J4 and P3 are alternative biofungicide for F.oxysporum.
Produksi Inulinase Pichia alni DUCC-W4 pada Tepung Umbi Dahlia (Dahlia variabilis Willd) dengan Variasi Konsentrasi Ammonium Nitrat dan Waktu Inkubasi Wijanarka, Wijanarka; Ferniah, Rejeki Siti; Salamah, Salamah
Bioma : Berkala Ilmiah Biologi Vol. 10, No. 2, Tahun 2008
Publisher : Departemen Biologi, Fakultas Sains dan Matematika, Universitas Diponegoro

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (74.151 KB) | DOI: 10.14710/bioma.10.2.58-64

Abstract

Inulinase (E.C.3.2.1.7) merupakan kelompok enzim hidrolase yang mampu menghidrolisis inulin menjadi fruktosa. Produksi fruktosa secara langsung dari inulin oleh enzim inulinase hanya memerlukan satu tahap reaksi enzimatis dan menghasilkan 90% fruktosa sehingga lebih efisien. Optimasi perlu dilakukan untuk meningkatkan produksi inulinase, antara lain dengan penambahan sumber nitrogen dan optimasi waktu inkubasi. Khamir merupakan salah satu mikroba yang dapat memproduksi enzim. Salah satu khamir inulinolitik yang berhasil diisolasi dari umbi dahlia yaitu Pichia alni DUCC-W4. Tujuan penelitian ini adalah mengetahui variasi konsentrasi NH4NO3 dan waktu inkubasi Pichia alni DUCC-W4 dalam memproduksi inulinase pada tepung umbi dahlia. Penelitian ini dilaksanakan di laboratorium mikrobiologi, Jurusan Biologi Fakultas MIPA Universitas Diponegoro. Penentuan aktivitas inulinase dilakukan dengan metode DNS. Penelitian ini menggunakan Rancangan Acak Lengkap (RAL) faktorial dengan 2 faktor. Faktor I (P0, P1, P2, dan P3) berupa konsentrasi NH4NO3 yang berbeda yaitu 0,029mM; 0,05 mM; 0,1 mM; 0,15 mM dan faktor II (H1, H2, dan H3) berupa waktu inkubasi (12 jam,18 jam, dan 24 jam). Masing – masing perlakuan diulang sebanyak 3 kali. Data yang diperoleh dianalisis dengan menggunakan metode ANOVA. Aktivitas inulinase masing – masing perlakuan pada waktu inkubasi 12 jam yaitu 0,567 U/mL, 0,407 U/mL, 0,304 U/mL, 0,486 U/mL, pada waktu inkubasi18 jam yaitu 0,761 U/mL, 0,644 U/mL, 0,543 U/mL, 0,554 U/mL, sedangkan waktu inkubasi 24 jam yaitu 0,564U/mL, 0,567 U/mL, 0,529U/mL, 0,612 U/mL. Berdasarkan hasil penelitian menunjukkan bahwa penambahan konsentrasi NH4NO3 pada medium produksi dan perbedaan waktu inkubasi tidak meningkatkan aktivitas inulinase Pichia alni DUCC-W4.
Produksi Dan Ekstraksi Inhibitor Alfa Glukosidase Dari Isolat Aktinomiset Jp-3 Pujiyanto, Sri; Ferniah, Rejeki Siti; S, Sunarno
Bioma : Berkala Ilmiah Biologi Vol. 17, No.2, Tahun 2015
Publisher : Departemen Biologi, Fakultas Sains dan Matematika, Universitas Diponegoro

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (102.608 KB) | DOI: 10.14710/bioma.17.2.123-129

Abstract

Alpha-glucosidase inhibitors are compounds that can prevent the digestion of complex carbohydrates into glucose, so potentially used as a diabetes drug. This study aims to examine the production and extraction of alpha-glucosidase inhibitor compound from Isolate Aktinomiset JP-3 from the sea. The supernatant obtained from the culture of the JP-3 isolate was extracted using various solvents to obtain the active compound. The solvents used were chloroform, methanol, and ethyl acetate. An assay of inhibitor activity of the α-glucosidase using p-nitrophenyl α-D-glucopyranoside substrate. The activity of the enzyme is measured based on the absorbance of p-nitrophenol produced from the breaking reaction of the substrate. The results showed that extraction of alpha-glucosidase inhibitor compound with ethyl acetate yielded extract with highest inhibitor activity. Keywords: alpha-glucosidase inhibitors, actinomycetes, diabetes, extraction, fractionation
Optimasi Isolasi DNA Cabai (Capsicum annuum L.) Berdasar Perbedaan Kualitas dan Kuantitas Daun serta Teknik Penggerusan Ferniah, Rejeki Siti; Pujiyanto, Sri
Bioma : Berkala Ilmiah Biologi Vol. 15, No.1, Tahun 2013
Publisher : Departemen Biologi, Fakultas Sains dan Matematika, Universitas Diponegoro

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (311.999 KB) | DOI: 10.14710/bioma.15.1.14-19

Abstract

Complete genome of chili has not been reported.The first step to study the genome is DNA isolation, so it is necessary to optimize the protocol to get an optimum DNA. This research aimed to optimize chili DNA isolation by variate the quantity and quality of chili leaves as row material and variate the grinding technique. DNA isolation was done using commercial kit without liquid nitrogen, and analyzed by agarose gel electrophoresis. The results showed that frozen chili leaf yields more DNA than fresh leaf, 0,1 g of leaf got optimum DNA, and grinding in mortar was better than in microtube.   Key words: DNA,  isolation, Capsicum annuum
Pengendalian Hayati Penyakit Hawar Daun Tanaman Kentang Dengan Agens Hayati Jamur-jamur Antagonis Isolat Lokal Purwantisari, Susiana -; Ferniah, Rejeki Siti; Raharjo, Budi -
Bioma : Berkala Ilmiah Biologi Vol. 10, No. 2, Tahun 2008
Publisher : Departemen Biologi, Fakultas Sains dan Matematika, Universitas Diponegoro

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1981.199 KB) | DOI: 10.14710/bioma.10.2.51-57

Abstract

Penyakit hawar daun tanaman kentang atau yang oleh petani di Kedu, Wonosobo disebut Lodoh merupakanpenyakit yang paling serius di antara penyakit dan hama yang menyerang tanaman kentang di Indonesia. Penyakitlodoh ini disebabkan oleh serangan jamur patogen ganas Phytophthora infestans yang dapat menurunkan produksikentang hingga 90% dari total produksi kentang dalam waktu yang amat singkat. Sampai saat ini kapang patogenpenyebab penyakit busuk batang dan daun tanaman kentang tersebut masih merupakan masalah krusial dan belumada fungisida yang benar-benar efektif terhadap penyakit tersebut. Penelitian ini bertujuan mengoleksi danmengidentifikasi jamur-jamur tanah isolat lokal yang bersifat antagonis terhadap patogen penyebab penyakit busukdaun dan umbi tanaman kentang. Hasil penelitian menunjukkan bahwa penyebab penyakit busuk daun dan umbitanaman kentang di daerah sentra pembibitan tanaman kentang di Kedu Temanggung Jawa Tengah adalahPhytophthora infestans. Terdapat 17 isolat jamur isolat lokal yang dapat diisolasi dari tanah di sentra pembibitantanaman kentang tersebut. Dari 17 isolat jamur ini dapat dikelompokkan menjadi 4 kelompok isolat yang berbedamorfologi koloninya. Pengamatan secara mikroskopis menunjukkan bahwa dari 4 kelompok jamur tanah tersebutadalah dari marga Trichoderma spp, Aspergillus sp, Penicillium sp dan Phytophthora infestans.
Aktifitas Inhibitor Alpha-Glukosidase Bakteri Endofit PR-3 yang Diisolasi dari Tanaman Pare (momordica charantia) Pujiyanto, Sri -; Ferniah, Rejeki Siti
Bioma : Berkala Ilmiah Biologi Vol. 12, No. 1, Tahun 2010
Publisher : Departemen Biologi, Fakultas Sains dan Matematika, Universitas Diponegoro

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (140.973 KB) | DOI: 10.14710/bioma, 12, 1, 1-5

Abstract

Some traditional medicinal plants are known to have efficacy as a medicine for diabetes. Active compoundsproduced by a plant can be derived from endophytic microbes that live in these plants. One way diabetes drugs workis to prevent digestion of complex carbohydrates into glucose so that glucose intake is reduced. Alpha-glucosidaseinhibitor is a compound that can prevent the digestion of carbohydrates, especially starch into glucose. This studyaimed to test the inhibitory activity of alpha gluosidase PR-3 isolate, an endophytic bacteria from Momordicacharantia. The results showed that the crude extract (supernatant) from PR-3 has the capability of the enzyme alphaglucosidase inhibition that is equal to 61.2% compared with positive control compound acarbose 1 mg / ml. Theresults also showed that the use of maltose as carbon source produce the highest an alpha glucosidase inhibitor(54,97%), followed by the starch (47.77%), glucose (31.97%), fructose (44.14%) and sucrose (27.7%).
ISOLASI KHAMIR DARI BATANG TANAMAN TEBU DAN IDENTIFIKASINYA BERDASARKAN SEKUENS INTERNAL TRANSCRIBED SPACER Anggraini, Ika; Ferniah, Rejeki Siti; Kusdiyantini, Endang
Jurnal Bioteknologi & Biosains Indonesia (JBBI) Vol. 6 No. 1 (2019): June 2019
Publisher : Balai Bioteknologi, Badan Pengkajian dan Penerapan Teknologi (BPPT)

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1938.168 KB) | DOI: 10.29122/jbbi.v6i1.3276

Abstract

Isolation of Yeasts from Sugarcane Stems and Their Identification Based on Internal Transcribed Spacer Sequences ABSTRACTFermentative yeasts used in food, health, and energy industries need to be explored to discover their potential. The purpose of this study was to obtain fermentative yeast isolates from sugarcane stems and subsequently to undertake morphological, biochemical, and molecular identification. The isolation of epiphytic and endophytic yeasts was carried out by spread plate method using sugarcane soak water and sugarcane juice on potato dextrose agar (PDA) and yeast-glucose-peptone (YGP) agar media. Morphological identification was based on macroscopic and microscopic observations. Biochemical identification was performed using carbohydrate fermentation and 50%-glucose media tests. Selected isolates were identified molecularly using Internal Transcribed Spacer (ITS). Seven yeast isolates were obtained, of which isolate Ed 1B was selected. Isolate ED 1B was of round colonies, creamy white colour, shiny, embossed, and wavy appearance, ovoid cell shape with a cell diameter of 4.74 µm. It had budding cells, was able to ferment glucose and sucrose (but not lactose), and grew on 50 %-glucose media. Results of BLAST showed that isolates Ed 1B had 99% homology with Kodamaea ohmeri.Keywords: isolation, ITS, molecular identification, Saccharum officinarum L., yeast ABSTRAKKhamir fermentatif yang digunakan dalam industri pangan, kesehatan dan energi perlu dieksplorasi untuk mengetahui potensinya. Tujuan penelitian ini adalah untuk memperoleh isolat khamir fermentatif dari batang tebu dan untuk kemudian diidentifikasi secara morfologi, biokimia dan molekuler. Isolasi khamir epifit dan endofit dilakukan dengan metode cawan sebar dari air rendaman tebu dan jus tebu pada media potato dextrose agar (PDA) dan yeast-glucose-peptone (YGP). Identifikasi morfologi berdasarkan pengamatan makroskopis dan mikroskopis. Identifikasi biokimia menggunakan uji fermentasi karbohidrat dan uji media glukosa 50%. Isolat terpilih diidentifikasi molekuler menggunakan Internal Transcribed Spacer (ITS). Hasil isolasi memperoleh 7 isolat khamir. Satu isolat terpilih (Ed 1B) didapatkan dan memiliki ciri-ciri koloni bulat, putih krem, mengkilap, timbul, bergelombang, bentuk sel ovoid dengan diameter sel 4,74 µm, memiliki budding cell, mampu memfermentasi glukosa dan sukrosa, tidak memfermentasi laktosa, serta tumbuh pada media glukosa 50%. Hasil BLAST menunjukkan bahwa isolat Ed 1B memiliki homologi 99% dengan Kodamaea ohmeri.Kata Kunci: identifikasi molekuler, isolasi, ITS, khamir, Saccharum officinarum L.
Co-Authors Achmadi Priyatmojo Ade Fajrian Adhitya Naufal Pribadhi Agung Suprihadi Anggraini, Ika Anggraini, Ika Anto Budiharjo Arina Tri Lunggani Arina Tri Lunggani Athried Elsima Budi - Raharjo BUDI SETIADI DARYONO Candra Wahyuningsih Chiesa Salsabila Diana Ayu Fitriana Dinda Khairunnisa Eka Oktaviani Eka Oktaviani eko purnomo Elke Gildantia Endang Kusdiyantini Endang Kusdiyantini Furgeva, Natasha Hermin Pancasakti Kusumaningrum Hesti Tri Rahayu Himmatul Ulya Himmatul Ulya HUSNUL KHOTIMAH Ika Anggraini Ika Anggraini Anggraini Is Helianti IS HELIANTI Istiana, Rohma Jennefer Constantia Jumari Jumari, Jumari Khoirin Nida Lina Mulyawati MG Isworo Rukmi Muhammad Zainuri Mulyawati, Lina Natasha Furgeva Nurhayati Nurhayati Nurmalisa Rizko Rina Sari Asih Rina Sri Kasiamdari Sabrini, Zalia salamah salamah Shelina Nurunnisa Mawarni Siti Nur Jannah Siti Nur Jannah Sri Darmanti Sri Pujiyanto Sri Pujiyanto Sri Pujiyanto Sri Pujiyanto Sri Pujiyanto Sunarno s Supriyadi Supriyadi Susiana - Purwantisari Susiana Purwantisari Tia Erfianti Vivi Suryaningsih Weni Lestari, Weni Wijanarka Wijanarka Yumna Rahmadias Hanifa Yunnia Rahmandanni